DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12942 and CG10654

DIOPT Version :10

Sequence 1:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster


Alignment Length:498 Identity:102/498 - (20%)
Similarity:165/498 - (33%) Gaps:144/498 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GSK---CRACLSVDRKTVQLNAE--VPNLQKTRTYAQSLKQCTNLD-LRVISPGGYLWPMQICVR 77
            |:|   |||||      |.|..:  ..||...:..|.....||..| :|.:.|  .|....|| .
  Fly    34 GAKTMICRACL------VLLGPQDACHNLDSEQDLASKYYGCTGEDAVRDLPP--QLVLKSIC-E 89

  Fly    78 CCRALEVAMH-FVEMALESNLKLQAEAKSVKLPSPTGELKRKASNETIPWNQFSQEFEQFVEGYE 141
            ||..|....| |..|..||....:...:.:.:..      .|..:.|  |:..           :
  Fly    90 CCYQLVQKFHDFQRMCAESLRNFEKLLQDIDIGC------HKLEDHT--WHDL-----------D 135

  Fly   142 GPIEENVLYMRGTKVPRLDVDASSSSETAPKEDEVILFDVKYDTNDLEEEDENDGSDAKNNETFF 206
            .|.|.|         ...:.:|.|.:.......|::.|                           
  Fly   136 TPSESN---------ESTNPEAQSHAPCIAATQEIVSF--------------------------- 164

  Fly   207 ENSITPGESVMVVSVAEKAVENNNNYNFNNKNGDVTDEECDLIQRALEMTLNDDGCSQSPKNEAS 271
               |.|...:.:..:..:..           .|...:||..:|:            .:|.|.:..
  Fly   165 ---IWPQVCLPLAVILSRIT-----------LGASLEEEVYVIE------------DESAKQDLG 203

  Fly   272 NETQLKSNGIEVSSPLFIKLATTSSTTGNIPILKCNICQYTHTDAEQLKIHYKSIHKISMMEDDI 336
            .|.      :.:||    ||.......|....|:|.||             ::..:|.|::|..:
  Fly   204 QEK------LSISS----KLLGARKRRGVRHTLECRIC-------------HRGFYKPSLLEAHM 245

  Fly   337 IGLNKNQNFKCRPC-NSYETKDRSEMQKHLIDHHKIDGDFEMYCYMQANCPACDRIFKDQRSARK 400
            ......:.:.|..| .||...:.  ::.||...|. :.|.....|.   ||:|::::...||.:.
  Fly   246 QQHEGLRPYTCVHCAKSYARANL--LESHLRQMHN-NADAARIIYA---CPSCNKVYTANRSLKY 304

  Fly   401 HYTRVHTPVQIAVSPTESYACTACDKVFNQKASLHSH---------QRFCQVKDVVHCSFCDQQF 456
            |..|.|.....:.||...:.|..|.|.|.:||.|..|         :|:|       |..||::|
  Fly   305 HMRRTHERYHESESPDARHICEECGKCFARKAHLTRHKMVHGSVEGRRYC-------CECCDRRF 362

  Fly   457 NSMRKYELHLQQLHAVET-VHECEICRRSFKSAETLTMHRKRH 498
            .:......||.:.|..:. :..|..|.|.|:::..|..|.::|
  Fly   363 YTKENMVDHLLRKHGNKNLLLRCRKCGRIFQNSVELNAHGRKH 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12942NP_610628.2 zf-AD 21..100 CDD:462262 27/85 (32%)
C2H2 Zn finger 385..406 CDD:275368 7/20 (35%)
C2H2 Zn finger 421..470 CDD:275368 16/57 (28%)
C2H2 Zn finger 449..466 CDD:275371 4/16 (25%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
C2H2 Zn finger 505..526 CDD:275368
C2H2 Zn finger 534..555 CDD:275368
CG10654NP_001261767.1 zf-AD 39..115 CDD:462262 26/84 (31%)
C2H2 Zn finger 228..248 CDD:275368 6/32 (19%)
SFP1 <243..310 CDD:227516 16/72 (22%)
C2H2 Zn finger 256..313 CDD:275368 17/62 (27%)
SFP1 <287..376 CDD:227516 27/98 (28%)
C2H2 Zn finger 289..314 CDD:275368 8/24 (33%)
C2H2 Zn finger 325..345 CDD:275368 8/19 (42%)
C2H2 Zn finger 355..376 CDD:275368 6/20 (30%)
C2H2 Zn finger 385..405 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.