DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12942 and az2

DIOPT Version :10

Sequence 1:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_610289.2 Gene:az2 / 35682 FlyBaseID:FBgn0025185 Length:593 Species:Drosophila melanogaster


Alignment Length:640 Identity:135/640 - (21%)
Similarity:216/640 - (33%) Gaps:211/640 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 EVAMHFVEMALESNLKLQAEAKSVKLPSPTGELKRKASNETIPWNQFSQEFEQFVEGYEGPIEEN 147
            |..:| |:..||:|..:|.|..:.::.|     ..|...|..|...|..|     |..|..:.|:
  Fly    37 EFIVH-VKEHLEANPSMQQELTTSEVIS-----SAKCEEEVSPAKVFIVE-----EPPENCLAED 90

  Fly   148 VLYMRGTKVPRLDVDASSSSE--TAPKEDEVILFDVKYDTNDLEEEDENDGSD-------AKNNE 203
            :.         :||..||.::  |:|.|:|.            ||:||.|.|.       ...|.
  Fly    91 MF---------VDVPPSSENDESTSPVEEEE------------EEDDEVDSSSMTVDCELGTRNS 134

  Fly   204 TFFENSITPGESVMVVSVAEKAVENNNNYNFNNKNGDVTDEECDLIQRALEMTLNDDGCSQSPKN 268
            |.|                  |.....|..|..::..:|    ..|:...:.|     |...|.:
  Fly   135 THF------------------APLTKFNPTFYRRSPRIT----QFIELYKQQT-----CLWDPAD 172

  Fly   269 EASNETQLKSNGIEVSSPLFIKLATTSSTTGNIPILKCNICQYTHTDAEQLKIHYKSIH------ 327
            |:..:.:.::|..|       :|......|.|:           |..|.:||....|:|      
  Fly   173 ESYRDKEKRANAYE-------ELLEQLKATVNL-----------HLTAYKLKKCITSLHAQYASI 219

  Fly   328 ------------------KISMM----------EDDIIGLNK--------NQ------------- 343
                              |.|.:          .||:.|..|        ||             
  Fly   220 SRQKKTQKLTKVPLYYHGKYSFLAERGSLEDADSDDVDGDGKIKLVFTEENQLTTQFIDLYSKFP 284

  Fly   344 -----------NFKCRPCNSYETKD--RSEMQKHLIDHHKIDGDFEMYCYMQANCPACDRIFKDQ 395
                       |...|..:..|..|  .||....|:.|      :::|..:|             
  Fly   285 QLYDPAHKHFCNLNVRKSSLIEITDLLTSEFSLGLVTH------YDVYDSIQ------------- 330

  Fly   396 RSARKHYTR---VHTPVQ-IAVS--------------PTESY----ACTACDKVFNQKASLHSHQ 438
             |.|:.|:|   ..|.|| :.:|              ||:|:    .|..|:..|:...:|.:||
  Fly   331 -SMRQWYSRRIKTLTDVQCVGLSLAEKQYIERCNSFMPTKSFRQKLKCEVCEHSFSTDHALQAHQ 394

  Fly   439 -RFCQVKD--VVHCSFCDQQFNSMRKYELHLQQLHAVETVHECEICRRSFKSAETLTMHRKRHSE 500
             |..::.|  ...|:.|:..|:.....:.|.|::| ::....||||.|||.....|.:|::.|.|
  Fly   395 FRDHKMGDGGWFRCTLCELNFDRKCHLQQHSQRVH-MDKSFVCEICSRSFAFGNQLAIHKRTHDE 458

  Fly   501 RHYQ-------CGKCSLNYVNSAELRVHYERAHVNEEPVSCLTCGNQFQNMTLLREHEQRSHQKS 558
            :|..       ||||   :....::..|....|.......|..|...|.....|::| .::|...
  Fly   459 KHVAKPFVCEFCGKC---FKQKIQMTTHVTAVHTKIRAFKCDMCPKDFLTKRDLKDH-VKAHLNI 519

  Fly   559 KVWRCEVCNFETKTRWRRRQHQYEHMDYPYKCQKCTSEFADRSKFRQHSKKVHGI 613
            :...||||...........:|::.|.:...:|..||:.|::|.....|.::.|.|
  Fly   520 RDKVCEVCQKAFTNANALVKHRHIHKEKTLQCSLCTTRFSERVSLGVHMRRTHKI 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12942NP_610628.2 zf-AD 21..100 CDD:462262 6/16 (38%)
C2H2 Zn finger 385..406 CDD:275368 4/23 (17%)
C2H2 Zn finger 421..470 CDD:275368 13/51 (25%)
C2H2 Zn finger 449..466 CDD:275371 3/16 (19%)
C2H2 Zn finger 478..498 CDD:275368 9/19 (47%)
C2H2 Zn finger 505..526 CDD:275368 5/20 (25%)
C2H2 Zn finger 534..555 CDD:275368 5/20 (25%)
az2NP_610289.2 MADF_DNA_bdg 157..242 CDD:463144 18/107 (17%)
MADF_DNA_bdg 276..>341 CDD:463144 14/84 (17%)
C2H2 Zn finger 377..398 CDD:275368 7/20 (35%)
C2H2 Zn finger 408..429 CDD:275368 5/20 (25%)
C2H2 Zn finger 436..456 CDD:275368 9/19 (47%)
C2H2 Zn finger 467..488 CDD:275368 5/23 (22%)
C2H2 Zn finger 496..516 CDD:275368 5/20 (25%)
C2H2 Zn finger 524..544 CDD:275368 5/19 (26%)
C2H2 Zn finger 551..572 CDD:275368 6/20 (30%)

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