DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12942 and hang

DIOPT Version :10

Sequence 1:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster


Alignment Length:571 Identity:105/571 - (18%)
Similarity:172/571 - (30%) Gaps:232/571 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 NDDGCSQSPKNEASNETQLKSNGIEVSSPLFIKLATTSSTTGNIPILKCNICQYTHTDAEQLKIH 322
            |..|...|....|:...|..:|. :.|:|       .|.....:|.: |.||...:.:...:..|
  Fly   997 NQVGGGGSTSASAAAAAQSSANR-DASAP-------KSQYFSRMPQV-CPICGQQYNNYNNVLRH 1052

  Fly   323 YKSIHKISMMEDDIIGLNKNQNFKCRPCN------SYETKDRSEMQKHLIDHHKID-----GDFE 376
            .:|.|...:.|          .:||..|.      ||       :::|:|:.|.:|     |.||
  Fly  1053 MESKHPNKLPE----------TYKCVRCGLGYPRISY-------LREHMINVHGVDKNRHSGGFE 1100

  Fly   377 ---------------------MYCYM--------------------------------------- 381
                                 .|.|:                                       
  Fly  1101 YIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDEEEEPGSVAKKMRLDDSSNNSSLV 1165

  Fly   382 -----QANCPACDRIFKD----QRSARKHYTRVH------------TPVQIAVSPT--------- 416
                 |..||.|:.:|.:    ....|.|||..:            ||..:.::.|         
  Fly  1166 GVASQQKECPICNAVFSNNIGLSNHMRSHYTASNAVNAALAAANRMTPKSLTITATPATDSELGV 1230

  Fly   417 -----ESYACTACD-------------KVFNQKASLHSHQRFCQVKDVVHCSFCDQQFNSMRKYE 463
                 ||...|..:             .||.:.....:.:||.:::    |..|.::|:|.:.|.
  Fly  1231 GGTMSESAPATPANVPPAMANQTPQEQAVFRRSLDQAADRRFRRMR----CRICQRRFSSKKSYR 1291

  Fly   464 LHLQQLHAVETVH--ECEICRRSFKSAETLTMHR-KRHSE--------RHYQCGKCSLNYVNSAE 517
            .|:...|.|:.|.  :|::|...|...:.|.:|. |.|.:        :.::|..||:.|.:.:|
  Fly  1292 YHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGKAIKDEMIIKQFECDVCSIVYSSESE 1356

  Fly   518 LRVHYERAH----------------VNEE-------PVS------------------------CL 535
            |:.|....|                ::::       |.|                        |.
  Fly  1357 LQQHKRSVHKLTSASASTSASTSSKIDDDSLMDDGKPTSSDLADLSTLAAGGSTASAPLYWYQCK 1421

  Fly   536 TCGNQFQNMTLLREHEQRSHQK--SKVWRCEVCN---FETKTRWRRRQHQYEHMDYPYKCQKCTS 595
            .|.:.|.....|..| ..||.:  |..:.|:.|.   ...|:.|..|..::..:..|.:|..|..
  Fly  1422 YCPSNFNTNKKLAIH-INSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPNPAECSLCRK 1485

  Fly   596 EFADRSKFRQH----------SKKVHGIELSDEQL-------AEMFREKKG 629
            .|.||.....|          |...|  :..|.||       ..:||.|.|
  Fly  1486 VFFDRQMHDNHTPTCNRKPITSTGAH--QQQDGQLHSHHTAKRTIFRHKTG 1534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12942NP_610628.2 zf-AD 21..100 CDD:462262
C2H2 Zn finger 385..406 CDD:275368 8/24 (33%)
C2H2 Zn finger 421..470 CDD:275368 11/61 (18%)
C2H2 Zn finger 449..466 CDD:275371 5/16 (31%)
C2H2 Zn finger 478..498 CDD:275368 6/20 (30%)
C2H2 Zn finger 505..526 CDD:275368 7/20 (35%)
C2H2 Zn finger 534..555 CDD:275368 5/20 (25%)
hangNP_001138204.1 zf-AD 80..154 CDD:462262
C2H2 Zn finger 1036..1057 CDD:275368 5/20 (25%)
C2H2 Zn finger 1067..1088 CDD:275368 6/27 (22%)
C2H2 Zn finger 1279..1298 CDD:275371 5/18 (28%)
C2H2 Zn finger 1308..1325 CDD:275371 4/16 (25%)
C2H2 Zn finger 1420..1440 CDD:275368 5/20 (25%)
C2H2 Zn finger 1450..1468 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.

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