DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12942 and CG8944

DIOPT Version :10

Sequence 1:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster


Alignment Length:419 Identity:90/419 - (21%)
Similarity:147/419 - (35%) Gaps:117/419 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 NNNYNFNNKNGDVTDEECDLIQRALEMTLNDDGCS---------QSPKNEASNETQLKSNGIEVS 284
            |..|::|:|..|...:|.. .:|......||...:         |...|....:.:.|....|..
  Fly   345 NEVYSYNDKMSDAVVKETS-YRRRFSAIWNDTSTAKLLSMVKRYQCFYNRFDPDYRSKERRGEGL 408

  Fly   285 SPLFIKL-----ATTSSTTGNIPILKCNICQYTHTDAEQLK------------IHYKSIHKISMM 332
            ..:.|:|     .||...:..|..|:.:   |:....|:|.            ::|..:|   .|
  Fly   409 HQMAIELQQLIDVTTIQISKRISQLRFD---YSKQKMERLNSERLGKKFIANYLYYDQMH---FM 467

  Fly   333 EDDIIGLNKNQNFKCRPCNSYETKDRSEMQKHLIDHH-KIDGDFEMYCYMQANCPACDRIFKDQR 396
            :|||      ..|||..|... .:...|:..|::.|. .:.|.:  ||.:      |...|.:.:
  Fly   468 DDDI------PPFKCAHCPEI-VQTLRELDLHMLTHQPSLGGGY--YCNI------CSIQFHNAQ 517

  Fly   397 SARKHYTRVHTPVQIAVSPTE-SYACTACDKVFNQKASLHSHQR----------FCQVKDVVHCS 450
            ....| .::|..     ..|| .:.|..|...|.:||:...|.|          ......::...
  Fly   518 EFDNH-KQLHLG-----GVTEIKFNCELCTASFREKANYDEHLRRHNEELFLPSLALNHSIMEGG 576

  Fly   451 FCDQQF----------NSMRKYELHLQQLHAVETVHE---------------------------- 477
            ..|.:.          .|.||      :.||.:...:                            
  Fly   577 LGDDEIGVEGEESRGSGSRRK------RRHAAKATDDMVDDDDRIGGGGGGGSGGGGTDIAKPYG 635

  Fly   478 CEICRRSFKSAETLTMHRKRHS---ERHYQCG--KCSLNYVNSAELRVHYERAHVNEEPVSCLTC 537
            |::|||||.:...|..||..|.   ||.|:|.  :|:.::|....|..|.::.:.||| ..|..|
  Fly   636 CDVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARNSLFEHLKQHYSNEE-FKCDIC 699

  Fly   538 GNQFQNMTLLREHEQRSHQKSKVWRCEVC 566
            |..|::...|:.|:| .|.|.|.:.|::|
  Fly   700 GKTFKSTKNLQNHKQ-IHDKIKRYVCQIC 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12942NP_610628.2 zf-AD 21..100 CDD:462262
C2H2 Zn finger 385..406 CDD:275368 3/20 (15%)
C2H2 Zn finger 421..470 CDD:275368 11/68 (16%)
C2H2 Zn finger 449..466 CDD:275371 4/26 (15%)
C2H2 Zn finger 478..498 CDD:275368 9/19 (47%)
C2H2 Zn finger 505..526 CDD:275368 5/22 (23%)
C2H2 Zn finger 534..555 CDD:275368 7/20 (35%)
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:463144
MADF 379..472 CDD:214738 19/104 (18%)
C2H2 Zn finger 476..496 CDD:275368 4/20 (20%)
C2H2 Zn finger 506..526 CDD:275368 4/26 (15%)
C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
C2H2 Zn finger 636..656 CDD:275368 9/19 (47%)
COG5048 <666..734 CDD:227381 20/64 (31%)
C2H2 Zn finger 666..688 CDD:275368 5/21 (24%)
C2H2 Zn finger 696..716 CDD:275368 7/20 (35%)
C2H2 Zn finger 724..744 CDD:275368 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.