DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12942 and Zfp275

DIOPT Version :10

Sequence 1:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001099813.1 Gene:Zfp275 / 293849 RGDID:1564630 Length:499 Species:Rattus norvegicus


Alignment Length:486 Identity:104/486 - (21%)
Similarity:173/486 - (35%) Gaps:125/486 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 TPGESVMVVSVAEKAVENNNNYNFNNKNGDVTDEECDLIQRALEMTLNDDGCSQSPKNEA-SNET 274
            |||..|:.|.:  :..|..:..:|:.....:|::|.      |.::|       ||:.:| :...
  Rat    24 TPGNQVLAVPL--EMPEAQDLVSFDIVPWHLTEQEW------LSLSL-------SPEQQALAYSR 73

  Fly   275 QLKSNGIEVSSPLFI------KLATTS----STTGNIPILKCNICQYTHTDAEQLKIHYKSIHKI 329
            .:.|.|:.|.:|..:      :|...|    ||..|           .|.::.....|.|...:.
  Rat    74 AVTSIGVPVVNPALVSHLSQGQLLLVSDPSLSTDHN-----------KHPESTSATSHQKMGEEA 127

  Fly   330 SMME----------DDIIGLNKN----------QN------FKCRPCNSYETKDRSEMQKHLIDH 368
            .:.|          |....:.:|          ||      |.|:.|.     |...::..|:.|
  Rat   128 QLQEMASTSSPRANDPSSEVKQNGDSGGRGGSPQNLPVEHHFACKECG-----DTFRLKVLLVQH 187

  Fly   369 HKIDGDFEMYCYMQANCPACDRIFKDQRSARKHYTRVHTPVQIAVSPTESYA------------- 420
            .::..:.:.:     .|..|.::|:......:| .:.|..|.....|..|:|             
  Rat   188 QRVHSEEKGW-----ECGDCRKVFRGVSEFNEH-RKSHAAVATQPRPGPSWALEDALEKREQMER 246

  Fly   421 ------CTACDKVFNQKASLHSHQRFCQVKDVVHCSFCDQQFNS----MRKYELHL--------- 466
                  |..|.|.|.:.|.|..|.|....:....|..|.|.|.:    .|..:||.         
  Rat   247 EAKPFECEECGKRFKKNAGLSQHLRVHSREKPFDCEECGQSFKANTHLFRHQKLHTSEKPFACKA 311

  Fly   467 --------------QQLHAVETVHECEICRRSFKSAETLTMHRKRHS-ERHYQCGKCSLNYVNSA 516
                          |::|......:|:.|.:||:....|..|::.|| .:.|.|..|...:..|:
  Rat   312 CSRDFLDRQELLKHQRMHTGHLPFDCDDCGKSFRGVNGLAEHQRIHSGAKPYGCPHCGKLFRRSS 376

  Fly   517 ELRVHYERAHVNEEPVSCLTCGNQFQNMTLLREHEQRSHQKSKVWRCEVCNFETKTRWRRRQHQY 581
            ||..| .|.|..|:|..|..||..|:..:.|.|| .|.|...:.:.|..|:...:......:|:.
  Rat   377 ELTKH-RRIHTGEKPYECNQCGKAFRQSSSLLEH-TRIHSGERPYACGDCSKAFRGPSDLIKHRR 439

  Fly   582 EHMDY-PYKCQKCTSEFADRSKFRQHSKKVH 611
            .|... ||:|.||...|...|...:| :::|
  Rat   440 IHSGLKPYECDKCGKAFRRSSGLSRH-RRIH 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12942NP_610628.2 zf-AD 21..100 CDD:462262
C2H2 Zn finger 385..406 CDD:275368 4/20 (20%)
C2H2 Zn finger 421..470 CDD:275368 16/75 (21%)
C2H2 Zn finger 449..466 CDD:275371 6/20 (30%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
C2H2 Zn finger 505..526 CDD:275368 7/20 (35%)
C2H2 Zn finger 534..555 CDD:275368 8/20 (40%)
Zfp275NP_001099813.1 C2H2 Zn finger 171..191 CDD:275370 5/24 (21%)
C2H2 Zn finger 199..219 CDD:275368 4/20 (20%)
SFP1 <202..274 CDD:227516 16/72 (22%)
COG5048 <252..493 CDD:227381 58/221 (26%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
C2H2 Zn finger 281..301 CDD:275368 5/19 (26%)
C2H2 Zn finger 309..329 CDD:275368 1/19 (5%)
C2H2 Zn finger 337..357 CDD:275368 6/19 (32%)
C2H2 Zn finger 365..385 CDD:275368 7/20 (35%)
C2H2 Zn finger 393..413 CDD:275368 8/20 (40%)
C2H2 Zn finger 421..441 CDD:275368 3/19 (16%)
C2H2 Zn finger 449..469 CDD:275368 6/20 (30%)
C2H2 Zn finger 477..497 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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