DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12942 and Zbtb41

DIOPT Version :10

Sequence 1:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001178599.1 Gene:Zbtb41 / 289052 RGDID:1560834 Length:908 Species:Rattus norvegicus


Alignment Length:654 Identity:147/654 - (22%)
Similarity:256/654 - (39%) Gaps:149/654 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 YLWPMQICVRCCRALEVAMHFVEMALESNL-KLQAEAKSVKLPSPT-GELKRKASNETIPWNQ-- 128
            |.:.:.:.:...:.|:: :..|::....|: ..|||......|..| .||..:.||.    :|  
  Rat   152 YKYEIPLVLEAAKFLDI-IDAVKLLNNENVATFQAELTDKSSPEETLNELTGRLSNN----HQCK 211

  Fly   129 -FSQEF--EQFVEGYEGPIEENVLY--MRGTKVPRLDVDASSSSETAPKEDEVILFDVKYDTNDL 188
             .|:.|  ::.:|.:......::|.  ..|.|:    ::.|.|:..:.:..:.   .||:|....
  Rat   212 FCSRHFCYKKSLENHLAKTHRSLLLGKKHGLKM----LERSFSTRRSKRNRKC---PVKFDDTSD 269

  Fly   189 EEEDENDGSDAKNNETFFE------NSITPGESVMVVSVAEKAVENNNNYNFNNK--NGDVTDEE 245
            :|::..||||..|.|:|.:      :|..||                ::||..::  ..:|:|||
  Rat   270 DEQESGDGSDNLNQESFDKERSDRNDSEDPG----------------SDYNVEDEELEEEVSDEE 318

  Fly   246 CDLIQRALEMTLNDDGCSQSPKNEASNETQLKSNGIEVSSPLFIKLATTS--------------- 295
            .|     .|.:..|:...:.|  ||::.......|:   :|:.|:.:...               
  Rat   319 SD-----TEQSDKDNDAEEEP--EAADSAGSIHEGL---APVVIQNSNKKILQCPKCDKTFDRIG 373

  Fly   296 ------------------------STTGNIPI---------------LKCNICQYTHTDAEQLKI 321
                                    ||..|:.:               .||..|...|...:.|..
  Rat   374 KYESHTRVHTGEKPFECDICHQRYSTKSNLTVHRKKHSSEVEFHKKEHKCPYCNKLHASKKTLAK 438

  Fly   322 HYKSIHKISMMEDDIIGLNKNQNFKCRPCNSYETKDRSEMQKHLIDHHKIDGDFE-MYC--YMQA 383
            |.|..|..:..|...|...|::::||..|....|: |..:::|:|.|.: |..|: .||  :.::
  Rat   439 HVKRFHPENAQEFISIKKTKSESWKCDICKKSFTR-RPHLEEHMILHSQ-DKPFKCTYCEEHFKS 501

  Fly   384 N----------------CPACDRIFKDQRSARKHYTRVHTPVQIAVSPTESYACTACDKVFNQKA 432
            .                |..|.|.|.|..:.::|....|       .....:.|..|.|...::.
  Rat   502 RFARLKHQEKFHLGPFPCDICGRQFNDTGNLKRHIECTH-------GGKRKWTCFICGKSVRERT 559

  Fly   433 SLHSHQRFCQVKDVVHCSFCDQQFNSMRKYELHLQQLHAVETVHECEICRRSFKSAETLTMHRKR 497
            :|..|.|....:....||.|.|.|.....|.||| ::|..:..:||:.|.::|...:.||.|:|.
  Rat   560 TLKEHLRIHSGEKPHLCSICGQSFRHGSSYRLHL-RVHHDDKRYECDECGKTFIRHDHLTKHKKI 623

  Fly   498 HS-ERHYQCGKCSLNYVNSAELRVHYERAHVNEEP--------VSCLTCGNQFQNMTLLREHEQR 553
            || |:.:||.:|...:.....|.|||:..|:.|:.        ..|..|...|:..:.|..| .|
  Rat   624 HSGEKAHQCEECGKCFGRRDHLTVHYKSVHLGEKVWQKYKATFHQCDVCKKIFKGKSSLEMH-FR 687

  Fly   554 SHQKSKVWRCEVCNFETKTRWRRRQHQYEHMD-YPYKCQKCTSEFADRSKFRQHSKKVHGIELSD 617
            :|...|.::|::||...:.:....:|...|.| .|:.||.|.:.|..:.|.:.|...||||:..|
  Rat   688 THSGEKPYKCQICNQSFRIKKTLTKHLVIHSDARPFNCQHCNATFKRKDKLKYHIDHVHGIKSPD 752

  Fly   618 EQLA 621
            :.|:
  Rat   753 DSLS 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12942NP_610628.2 zf-AD 21..100 CDD:462262 4/32 (13%)
C2H2 Zn finger 385..406 CDD:275368 6/20 (30%)
C2H2 Zn finger 421..470 CDD:275368 15/48 (31%)
C2H2 Zn finger 449..466 CDD:275371 7/16 (44%)
C2H2 Zn finger 478..498 CDD:275368 7/19 (37%)
C2H2 Zn finger 505..526 CDD:275368 6/20 (30%)
C2H2 Zn finger 534..555 CDD:275368 6/20 (30%)
Zbtb41NP_001178599.1 BTB_POZ_ZBTB41 67..180 CDD:349535 3/28 (11%)
C2H2 Zn finger 362..382 CDD:275368 0/19 (0%)
C2H2 Zn finger 390..410 CDD:275368 3/19 (16%)
C2H2 Zn finger 423..441 CDD:275368 5/17 (29%)
C2H2 Zn finger 464..484 CDD:275368 6/20 (30%)
zf-H2C2_2 476..501 CDD:463886 7/25 (28%)
C2H2 Zn finger 492..509 CDD:275368 2/16 (13%)
C2H2 Zn finger 519..540 CDD:275368 6/20 (30%)
C2H2 Zn finger 548..568 CDD:275368 6/19 (32%)
C2H2 Zn finger 576..596 CDD:275368 9/20 (45%)
zf-C2H2 602..624 CDD:395048 8/21 (38%)
C2H2 Zn finger 604..624 CDD:275368 7/19 (37%)
zf-H2C2_2 616..639 CDD:463886 10/22 (45%)
C2H2 Zn finger 632..650 CDD:275368 5/17 (29%)
C2H2 Zn finger 669..686 CDD:275368 5/17 (29%)
zf-H2C2_2 681..704 CDD:463886 8/23 (35%)
C2H2 Zn finger 697..717 CDD:275368 4/19 (21%)
C2H2 Zn finger 725..742 CDD:275368 5/16 (31%)

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