Protein Alignment CG12942 and mld

DIOPT Version :10

• Sequence 1: NP_610628.2
• Gene: CG12942 / 36158
• FlyBaseID: FBgn0033569
• Length: 686
• Species: Drosophila melanogaster
• Sequence 2: NP_001247289.1
• Gene: mld / 2768685
• FlyBaseID: FBgn0263490
• Length: 1965
• Species: Drosophila melanogaster
• Alignment Length: 290
• Identity: 71/290 - (24%)
• Similarity: 122/290 - (42%)
• Gaps: 43/290 - (14%)

  Fly   407 TPVQIAVSPTESYACTACDKVFNQKASLH-SHQRFCQVKDVVHCSFCDQQFNSMRKYELHLQQLH 470
            ||...|..|:.:.|.|.      |.:.|. ||          ||.:|:::|.:....:.|.|..|
  Fly  1698 TPASPAPPPSPAVASTV------QVSELRTSH----------HCLYCEERFTNEISLKKHHQLAH 1746

  Fly   471 AVETV--HECEICRRSFKSAETLTMHRKRH--SERHYQCGKCSLNYVNSAELRVHYERAHVNEEP 531
            ...|.  :.|.||:|.::....|..|.:.|  ..|.|:|..|.:.:...::|.:|....|:..:|
  Fly  1747 GALTTMPYVCTICKRGYRMRTALHRHMESHDVEGRPYECNICRVRFPRPSQLTLHKITVHLLSKP 1811

  Fly   532 VSCLTCGNQFQNMTLLREHEQRSHQKSKVWRCEVCNFETKTRWRRRQHQYEHMDYPYKCQKCTSE 596
            .:|..||.||...:.|:.|.:...:..  ::|:.|:...:.....|:|:..|.:..|||:.|.|.
  Fly  1812 HTCDECGKQFGTESALKTHIKFHGELG--YQCDGCDRTFEYLKELRKHRRTHSEMFYKCKFCPSS 1874

  Fly   597 FADRSKFRQHSKKVH---GIELSDEQLAEMFREKKGYTNRHDAFNKSINSLEIPG--LTEDCFTE 656
            |...:.||.| .|.|   |:..:::..:    :.....|.|.:.:|    ||.|.  :.|...|.
  Fly  1875 FMRFTNFRAH-MKTHLPLGVFRNEDAAS----KSPSNNNSHASSDK----LENPATPIEETPLTP 1930

  Fly   657 LESLG------VDYDAITTDLFASSAALDN 680
            :.|.|      .:|.........:|.||::
  Fly  1931 MSSGGHLYHSPDEYPNSVESCAGNSVALES 1960

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12942	NP_610628.2	zf-AD	21..100	CDD:462262
		C2H2 Zn finger	385..406	CDD:275368
		C2H2 Zn finger	421..470	CDD:275368	11/49 (22%)
		C2H2 Zn finger	449..466	CDD:275371	3/16 (19%)
		C2H2 Zn finger	478..498	CDD:275368	6/19 (32%)
		C2H2 Zn finger	505..526	CDD:275368	4/20 (20%)
		C2H2 Zn finger	534..555	CDD:275368	7/20 (35%)
mld	NP_001247289.1	zf-AD	186..255	CDD:214871
		PAT1	<959..>1109	CDD:401645
		C2H2 Zn finger	1365..1388	CDD:275368
		C2H2 Zn finger	1396..1416	CDD:275368
		C2H2 Zn finger	1424..1445	CDD:275368
		C2H2 Zn finger	1725..1746	CDD:275368	5/20 (25%)
		C2H2 Zn finger	1756..1776	CDD:275368	6/19 (32%)
		C2H2 Zn finger	1785..1806	CDD:275368	4/20 (20%)
		zf-C2H2	1812..1834	CDD:395048	7/21 (33%)
		C2H2 Zn finger	1814..1834	CDD:275368	7/19 (37%)
		zf-C2H2	1839..1861	CDD:395048	4/21 (19%)
		C2H2 Zn finger	1841..1861	CDD:275368	4/19 (21%)
		zf-C2H2	1866..1888	CDD:395048	10/22 (45%)
		C2H2 Zn finger	1868..1888	CDD:275368	8/20 (40%)