DRSC/TRiP Functional Genomics Resources

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Protein Alignment cag and JRK

DIOPT Version :10

Sequence 1:NP_477207.1 Gene:cag / 36157 FlyBaseID:FBgn0017414 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_003715.3 Gene:JRK / 8629 HGNCID:6199 Length:568 Species:Homo sapiens


Alignment Length:179 Identity:47/179 - (26%)
Similarity:87/179 - (48%) Gaps:18/179 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GRVRKPRTSLTLEEKMEVIQSQERNKLSVRDLAKRFNIGKTQAADILKHKQSIKEGLLSGEL-KL 67
            |..|| |..|||:||:::....|:.: |.:.|.:.:|:|.:...||..||..:.....|.:. |.
Human    12 GEKRK-RVVLTLKEKIDICTRLEKGE-SRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSDSNKA 74

  Fly    68 NQMRRNPLSQRGAQIDEMCFDWFSRVRTENIPISGEMVRKKAKQLAVELGHSNFSA-SSGWLEKW 131
            .:.||...:.:...:|.:.::||...|:|.:|:||.|:.:|||....::..:.... |.|||.::
Human    75 LEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTEPCVFSGGWLWRF 139

  Fly   132 RKRHNVRYND------TGDSLDLQEFEAIL--------VKSEPISNKDD 166
            :.||.::..|      :.|....::|.|..        :.:|.:.|.|:
Human   140 KARHGIKKLDASSEKQSADHQAAEQFCAFFRSLAAEHGLSAEQVYNADE 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cagNP_477207.1 CENP-B_N 7..56 CDD:461229 17/48 (35%)
CENPB 78..141 CDD:197828 18/63 (29%)
JRKNP_003715.3 CENP-B_N 14..66 CDD:461229 17/53 (32%)
CENPB 83..147 CDD:197828 18/63 (29%)
DDE_1 213..382 CDD:367380
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 439..482
Blue background indicates that the domain is not in the aligned region.

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