DRSC/TRiP Functional Genomics Resources

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Protein Alignment cag and Tigd2

DIOPT Version :9

Sequence 1:NP_001260876.1 Gene:cag / 36157 FlyBaseID:FBgn0017414 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_001074614.1 Gene:Tigd2 / 68140 MGIID:1915390 Length:525 Species:Mus musculus


Alignment Length:137 Identity:41/137 - (29%)
Similarity:77/137 - (56%) Gaps:11/137 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RKPRTSLTLEEKMEVIQSQERNKLSVRDLAKRFNIGKTQAADILKHKQSI-----KEGLLSGELK 66
            ::.|..||:::|:::|:..|... |.:.|:..:.||::...||.|:|:.|     .....||..|
Mouse     4 KRKRVVLTIKDKLDIIKKLEEGN-SFKKLSVLYGIGESTVRDIKKNKERIINYANSSDPTSGVSK 67

  Fly    67 LNQMRRNPLSQRGAQIDEMCFDWFSRVRTENIPISGEMVRKKAKQLAVELG-HSNFSASSGWLEK 130
            ...|:    |....::|.:..:||::.:|:.||:||.:..|:|:.....|| ..:|:||||||.:
Mouse    68 RKSMK----SSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQARFFFDALGMEGDFNASSGWLTR 128

  Fly   131 WRKRHNV 137
            :::||.:
Mouse   129 FKQRHGI 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cagNP_001260876.1 CENP-B_N 7..60 CDD:282122 15/57 (26%)
CENPB 78..141 CDD:197828 21/61 (34%)
Tigd2NP_001074614.1 HTH 4..52 CDD:304362 14/48 (29%)
HTH_Tnp_Tc5 76..135 CDD:281246 21/58 (36%)
DDE_1 207..385 CDD:281213
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3105
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1343623at2759
OrthoFinder 1 1.000 - - FOG0000365
OrthoInspector 1 1.000 - - otm42505
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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