DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cag and LOC1269486

DIOPT Version :10

Sequence 1:NP_477207.1 Gene:cag / 36157 FlyBaseID:FBgn0017414 Length:225 Species:Drosophila melanogaster
Sequence 2:XP_061505786.1 Gene:LOC1269486 / 1269486 VectorBaseID:AGAMI1_011487 Length:578 Species:Anopheles gambiae


Alignment Length:186 Identity:52/186 - (27%)
Similarity:100/186 - (53%) Gaps:19/186 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RKPRTSLTLEEKMEVIQSQERNKLSVRDLAKRFNIGKTQAADILKHKQSIKEGLLSGELKLNQMR 71
            |:.:|.|||::|:.:|...|..: :.::|||.|.||:..|.||:|.|:.|::.:.:.|.....::
Mosquito    10 RRKKTMLTLDQKLCLIDRHESGE-TPQNLAKSFKIGEQTARDIIKQKEKIRKFVQNCESSEGPIK 73

  Fly    72 RNPLSQRG-AQIDEMCFDWFSRVRTENIPISGEMVRKKAKQLAVELG-HSNFSASSGWLEKWRKR 134
            |..:.... .::||....|::..|...||::..|..::||.|..:|| ...|:||:|||.::::|
Mosquito    74 RKSMKVSSFEELDESMLRWYNENRASGIPVTSAMCIQQAKLLHEQLGLKGTFNASAGWLSRFKQR 138

  Fly   135 HNVR--YN----DTGDSLDLQEFEAILVKSEPISNKDDCDEPYPVTLIEPIYSTEE 184
            :.:.  |:    .||.|:....|:   .:.:.:..|:|       .|::.||:.:|
Mosquito   139 YGIAGVYSHSVAKTGCSVAAFTFQ---YQFQQLIQKED-------YLLDQIYNADE 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cagNP_477207.1 CENP-B_N 7..56 CDD:461229 19/48 (40%)
CENPB 78..141 CDD:197828 20/70 (29%)
LOC1269486XP_061505786.1 None

Return to query results.
Submit another query.