DRSC/TRiP Functional Genomics Resources

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Protein Alignment cag and Cenpb

DIOPT Version :10

Sequence 1:NP_477207.1 Gene:cag / 36157 FlyBaseID:FBgn0017414 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_031708.2 Gene:Cenpb / 12616 MGIID:88376 Length:599 Species:Mus musculus


Alignment Length:134 Identity:47/134 - (35%)
Similarity:81/134 - (60%) Gaps:12/134 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RTSLTLEEKMEVIQSQERN-KLSVRDLAKRFNIGKTQAADILKHKQSI-----KEGLLSGELKLN 68
            |..||..||..:||..|.| .|...::|:||||..:..:.|||:|::|     |.|:.|...|.|
Mouse     5 RRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTN 69

  Fly    69 QMRRNPLSQRGAQIDEMCFDWFSRVRTENIPISGEMVRKKAKQLAVELGHSNFSASSGWLEKWRK 133
            ::  :|..    :::.:...||.::|...:|:.|.::::||.::|.|||..:|:||:|||:::|:
Mouse    70 KL--SPYD----KLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWLDRFRR 128

  Fly   134 RHNV 137
            ||.|
Mouse   129 RHGV 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cagNP_477207.1 CENP-B_N 7..56 CDD:461229 19/46 (41%)
CENPB 78..141 CDD:197828 21/60 (35%)
CenpbNP_031708.2 CENP-B_N 2..56 CDD:461229 20/50 (40%)
CENPB 74..135 CDD:197828 21/63 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..183
DDE_1 222..384 CDD:367380
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 394..476
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 498..543
Homodimerization. /evidence=ECO:0000250 536..599
CENP-B_dimeriz <538..598 CDD:462657
Blue background indicates that the domain is not in the aligned region.

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