DRSC/TRiP Functional Genomics Resources

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Protein Alignment cag and tigd5

DIOPT Version :10

Sequence 1:NP_477207.1 Gene:cag / 36157 FlyBaseID:FBgn0017414 Length:225 Species:Drosophila melanogaster
Sequence 2:XP_012820589.1 Gene:tigd5 / 100491467 XenbaseID:XB-GENE-6257697 Length:536 Species:Xenopus tropicalis


Alignment Length:185 Identity:44/185 - (23%)
Similarity:80/185 - (43%) Gaps:43/185 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RTSLTLEEKMEVIQSQERNKLSVRDLAKRFNIGKTQAADILKHKQSIKEGLLSGELKLNQMRRNP 74
            |.:.::::|:|.|:              |...|:.||:  :.....:..|.|.|.||..|..|..
 Frog     7 RKAYSIKDKLEAIE--------------RVKNGERQAS--VSRDFGVPGGTLRGWLKDEQKLRWF 55

  Fly    75 LSQRGA---------------QIDEMCFDWFSRVRTENIPISGEMVRKKAKQLAVEL--GHSNFS 122
            |.|.|.               :||...:.||..:|.:.||:||.:::.:|:..|.::  ....|.
 Frog    56 LDQLGGDVGTHRKKMRLANEEEIDRAVYSWFISLRQQGIPLSGPIIQAQAEAFAKQIYGDECTFK 120

  Fly   123 ASSGWLEKWRKRHNVR----YNDTGDSLDLQEFEAILVKSE----PISNKDDCDE 169
            ||.||..:|:|||.:.    |.::  .:...|.:.:::..|    |:::....||
 Frog   121 ASHGWFWRWQKRHGISSQRIYGES--EVRQTEMDPVIIFPEQPNTPVADSGYGDE 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cagNP_477207.1 CENP-B_N 7..56 CDD:461229 8/45 (18%)
CENPB 78..141 CDD:197828 22/83 (27%)
tigd5XP_012820589.1 CENP-B_N 7..56 CDD:461229 15/64 (23%)
HTH_Tnp_Tc5 76..136 CDD:460850 20/59 (34%)
DDE_3 208..387 CDD:481203
Blue background indicates that the domain is not in the aligned region.

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