DRSC/TRiP Functional Genomics Resources

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Protein Alignment cag and LOC100150296

DIOPT Version :10

Sequence 1:NP_477207.1 Gene:cag / 36157 FlyBaseID:FBgn0017414 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_001373720.1 Gene:LOC100150296 / 100150296 -ID:- Length:435 Species:Danio rerio


Alignment Length:130 Identity:33/130 - (25%)
Similarity:67/130 - (51%) Gaps:18/130 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 TLEEKMEVIQSQER-NKLSVRDLAKRFNIGKTQAADILK---HKQSIKEGL--LSGELKLNQMRR 72
            :|:|:..:::..:| .::.:...|:..|:    :|.:|.   .|:::|...  |||.:.      
Zfish    10 SLQERKHILEKYDRLPQMPLNAAARLLNV----SAPLLSIWLRKRNMKNAKSDLSGAVY------ 64

  Fly    73 NPLSQRGAQIDEMCFDWFSRVRTENIPISGEMVRKKAKQLAVELGHSNFSASSGWLEKWRKRHNV 137
              ||.:..|::...:.|......:.|.::..|:|.||.::|.|:|.|||.|:|.||::::.|..|
Zfish    65 --LSCKTHQLEAALWRWIDASFADGITVNEPMIRGKAIRVAEEMGLSNFRANSAWLKRFKSREPV 127

  Fly   138  137
            Zfish   128  127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cagNP_477207.1 CENP-B_N 7..56 CDD:461229 8/45 (18%)
CENPB 78..141 CDD:197828 19/60 (32%)
LOC100150296NP_001373720.1 HTH_Tnp_Tc5 69..124 CDD:460850 17/54 (31%)
HTH_Tnp_Tc5 166..220 CDD:460850
HTH_Tnp_Tc5 252..307 CDD:460850
Blue background indicates that the domain is not in the aligned region.

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