DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30020 and Zfp688

DIOPT Version :10

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_081275.3 Gene:Zfp688 / 69234 MGIID:1916484 Length:274 Species:Mus musculus


Alignment Length:90 Identity:20/90 - (22%)
Similarity:40/90 - (44%) Gaps:16/90 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   716 DFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIKHYKTVHK 780
            |....|.:|:    |:.|.::||......:|..:|.|..|:.|..|...:. ::..:|.::.:|:
Mouse   173 DIQASQRRHV----CVDCGRRFTYPSLLVSHRRMHSGERPFPCPECGVRFK-RKFAVKAHQWIHR 232

  Fly   781 -----RMPTRDMVQA------KGDK 794
                 |...|..::|      :||:
Mouse   233 SCSGGRRGRRPGIRAVPGAPVRGDR 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..103 CDD:214871
C2H2 Zn finger 369..389 CDD:275368
C2H2 Zn finger 397..418 CDD:275368
C2H2 Zn finger 442..460 CDD:275368
C2H2 Zn finger 730..750 CDD:275368 5/19 (26%)
C2H2 Zn finger 758..777 CDD:275368 3/18 (17%)
C2H2 Zn finger 1089..1110 CDD:275368
C2H2 Zn finger 1124..1144 CDD:275368
C2H2 Zn finger 1151..1172 CDD:275368
C2H2 Zn finger 1180..1203 CDD:275368
C2H2 Zn finger 1210..1230 CDD:275368
C2H2 Zn finger 1238..1254 CDD:275368
Zfp688NP_081275.3 KRAB 26..86 CDD:214630
zf-C2H2 181..203 CDD:395048 6/25 (24%)
C2H2 Zn finger 183..203 CDD:275368 5/19 (26%)
zf-H2C2_2 196..220 CDD:463886 6/24 (25%)
C2H2 Zn finger 211..231 CDD:275368 3/20 (15%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.