DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30020 and znf513a

DIOPT Version :9

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_001296396.1 Gene:znf513a / 568216 ZFINID:ZDB-GENE-030131-9895 Length:548 Species:Danio rerio


Alignment Length:658 Identity:133/658 - (20%)
Similarity:215/658 - (32%) Gaps:224/658 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   646 PV-VDGDDIVIDNNNISLDFDAENLFE---DFEEEEDD--TVADEEDEAD--------NEDENDN 696
            || :|.:|.|......:|.|:::.|..   :|.:.::|  .:..|:..||        .::||  
Zfish    11 PVKLDSEDGVGTVRPTNLTFESDFLLGQELEFSDPDNDQKIIGLEKFSADISLPGFPLGDEEN-- 73

  Fly   697 NDAATDQNLLLTSDDDDVDDFDDEQSKHLQK----------------------------PYCIYC 733
               :....|.:.||.||:...:.|:.:.:.:                            |||:.|
Zfish    74 ---SPFSRLSMESDADDLRATESEREERVSESAFPSYLSCRGCGQLLEDPLGPGMDLVGPYCMRC 135

  Fly   734 NKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIKHYKTVHKRMPTRDMVQAK---GDKV 795
            .|.....       .|.|       :||:.|                      .:||:   |...
Zfish   136 CKGNVEG-------IVDR-------KLCSGL----------------------GLQAESRGGGNE 164

  Fly   796 SVARTNIEKLYPGRIKNPMLMCAKCPFECESDSEMRKHLNAHHGINDGVSEHANEVFIIRKLPFE 860
            ........||:         .|..|.|.....:.:::|:..|:|                :.|:.
Zfish   165 GTGEDGSLKLH---------SCTLCGFTSRYTNHVKRHMKTHNG----------------EKPYG 204

  Fly   861 CPRCIRSFAAKTTLSRHLQRSHLVDTIIEMQTPHCGE----AITTTMATSSSTISEPVNSVTVDG 921
            ||.|..:.|....|.|||:             .|.||    ..|.|.|.||      :.::.   
Zfish   205 CPLCSYASAQLVNLQRHLR-------------IHTGEKPYKCNTCTFACSS------LGNLK--- 247

  Fly   922 QHNEMMQTDVGAEKMTEAL-GNGDGNEEGGTDDGTGVKAEPAVPEEELDPVTLDAATAVTTTAIA 985
            :|..|..|....:.:|:.: |||..:.....      |.:.|||               ..|.:|
Zfish   248 RHQRMHATIGPGQSVTQPVSGNGLNHSTAAQ------KEKEAVP---------------APTEVA 291

  Fly   986 AAISAAA----AATATSLESPVATTASSSTTLFPTPTPFDFDYDIMRDEAQQSSPNIHDVSKALS 1046
            .|:.:..    ......|::                      :|.:| .|||:|..:....:|.|
Zfish   292 GAVRSVTRPHMGRDGNYLQT----------------------FDGLR-LAQQTSTGVLQSGQAAS 333

  Fly  1047 DNAS-------SSCPINESYKLLSTTALETSPAKGLRSNSRLHRSSIHICKLCNQTFDELGKLVK 1104
            ..|:       .:|       .|...||:....           ||..||..|  |.:.|.|   
Zfish   334 QPAALPPMFFPFTC-------RLCGMALDDEDG-----------SSAQICAKC--TLEMLTK--- 375

  Fly  1105 HEMELHSNTERSRWGYQHKCAICNTSYRTLTLLKFHMKRHSNRKS-QCKLCPKSFVTIAELERHT 1168
               :.| .....|....:.||.|.........|..|||.||..|. :|..|..:......|:||.
Zfish   376 ---DTH-GCPAERGDKVYTCAACPFLTHYPNHLARHMKTHSGEKPYKCPQCDYASAHFDNLKRHH 436

  Fly  1169 KAKHSKDKTLRCFMDGCRKTFAFKHHLIRHQKASHLSTRYICPVCNKEEKSNVHLKNHMSVHKGE 1233
            :. |:.:|..:|.:  |........:|.|||:....:..:.|.:||.....:::||.||..|.||
Zfish   437 RV-HTGEKPYKCHL--CDYACGNLANLKRHQRVHSGAKPFQCAICNYSCNQSMNLKRHMLRHTGE 498

  Fly  1234 ITYKCPKC 1241
            ..:||.:|
Zfish   499 KPHKCQEC 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..106 CDD:285071
C2H2 Zn finger 369..389 CDD:275368
C2H2 Zn finger 397..418 CDD:275368
C2H2 Zn finger 442..460 CDD:275368
C2H2 Zn finger 730..750 CDD:275368 3/19 (16%)
C2H2 Zn finger 758..777 CDD:275368 3/18 (17%)
C2H2 Zn finger 1089..1110 CDD:275368 5/20 (25%)
C2H2 Zn finger 1124..1144 CDD:275368 7/19 (37%)
C2H2 Zn finger 1151..1172 CDD:275368 5/20 (25%)
C2H2 Zn finger 1180..1203 CDD:275368 6/22 (27%)
C2H2 Zn finger 1210..1230 CDD:275368 7/19 (37%)
C2H2 Zn finger 1238..1254 CDD:275368 2/4 (50%)
znf513aNP_001296396.1 C2H2 Zn finger 177..197 CDD:275368 4/19 (21%)
zf-H2C2_2 189..214 CDD:290200 7/40 (18%)
COG5048 201..>503 CDD:227381 88/397 (22%)
C2H2 Zn finger 205..225 CDD:275368 8/32 (25%)
zf-H2C2_2 217..242 CDD:290200 10/37 (27%)
C2H2 Zn finger 233..253 CDD:275368 6/28 (21%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
zf-H2C2_2 403..428 CDD:290200 9/24 (38%)
C2H2 Zn finger 419..439 CDD:275368 5/20 (25%)
zf-H2C2_2 431..454 CDD:290200 7/25 (28%)
C2H2 Zn finger 447..467 CDD:275368 6/21 (29%)
zf-H2C2_2 459..484 CDD:290200 7/24 (29%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
zf-H2C2_2 487..510 CDD:290200 10/20 (50%)
C2H2 Zn finger 503..523 CDD:275368 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.