DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and si:dkey-154p10.3

DIOPT Version :9

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:XP_692110.2 Gene:si:dkey-154p10.3 / 563659 ZFINID:ZDB-GENE-070912-380 Length:646 Species:Danio rerio


Alignment Length:867 Identity:147/867 - (16%)
Similarity:259/867 - (29%) Gaps:334/867 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 EPVQPLKTMRHECQVCGVVLYN-RLELKQHIRQHAEGL---SYNCKLCSFTSLKQRTLFEHYVTM 190
            :.|||:.....|..|...:..| .:.::.|:....|..   .|.|::|.|||..:..:..|.:..
Zfish     9 QDVQPVTLRLAEENVTSSLYCNSAVGIEAHVSTLVEAFLVEVYRCRICQFTSSHKAKISHHVMER 73

  Fly   191 HNMPLSQAEEYVKSKHLPAPKEEEVKAVCTLEDMELLIPTVLRPEDYVQPHPHIDNDQLRDIDHQ 255
            |: |:|..      .|||..::|:.:::|    :|:.:    ..|:.|:   |..:....:.|.|
Zfish    74 HD-PVSPC------PHLPCLEKEDEESLC----VEMRV----NDEEEVE---HNSSPYDLESDLQ 120

  Fly   256 LAVSMDEPVPSVDSLTSTLP---------PMDTPNVSIGTEYLVLPDGSLQQVNGSGVVIEYIDD 311
            .....:|....::.::..||         |... ::.:|:.    .||:|.......|...:.:|
Zfish   121 SGSKSNEDQMDMERISFLLPMYGMFQNISPRSC-DIGLGSS----SDGNLHVAQTCEVSTLFEED 180

  Fly   312 SKPNSSSNVNV-----SLQNLLSSHNDPMDIDVNELIVEEMMPQIRI-------------KPKPA 358
            ...::|....|     :..:|....|..||.:|.:   |||.....:             :|..|
Zfish   181 RHDDNSDEERVFQLEDASTDLTVPLNSGMDTEVQD---EEMAQSAHLMTLGLCRISSTKGQPSSA 242

  Fly   359 VIGTSIHKHK----------------------CKFCPKTFSTVARLKSHQLTHSNLPKFFCDQCD 401
            ....|:.:.:                      |..|....|:...|..|...||....|.|.:|.
Zfish   243 TSAKSLPEGEQDAGDASMDAVMQKTEEDGGLACILCQTVASSRVMLDVHLKCHSGEQGFRCPRCG 307

  Fly   402 FYSLRSADLIQHYKMVHHRVDENGKTGKEQAQGIESRVYSCDMCLFETSTVSQLRTHYKERHTVQ 466
            :.|...||:..|:::  |        ||.:.    ::.:.|.:|. .:...:..|..::|||..|
Zfish   308 WESEEWADMEHHWRL--H--------GKRKG----TKRHRCSVCP-RSFRRADSRDAHEERHNHQ 357

  Fly   467 PTEVQLRPSWTGEPTT---------------------TRG------VAAKQQTPAKILNHTDIPL 504
            ...   |.|.:|||..                     .:|      ...|::|..|.|.|     
Zfish   358 RHH---RRSESGEPVQCSFCLEWCHSGKEWEIHQHCHVQGGFKCLHCDFKEKTWKKTLKH----- 414

  Fly   505 GIKYPPGVLETQAPLPQPVVHQPMPDPMQQTEPMATTSTTITESGDINVVVDATPLFYAATSNSL 569
                               :|      .|..:..|.....|..|.||                  
Zfish   415 -------------------IH------TQHKQAEANQDNQIAHSRDI------------------ 436

  Fly   570 LVTNPAPVTTVEETTGTASNHAFGIFPEISEGNLPVNEAVQQAPANSSSVSVFGDMQDFIDNTDV 634
                       ::.:.:|.      :||......|                              
Zfish   437 -----------QQLSSSAK------YPECLRRMQP------------------------------ 454

  Fly   635 AAICTIPADGMPVVDGDDIVIDNNNISLDFDAENLFEDFEEE--EDDTVADEEDEADNEDENDNN 697
                                             .|:....::  ::..|..|:.....:|...:.
Zfish   455 ---------------------------------ELWSQIRKKKVKNRAVGKEKSNEGGKDRVKHL 486

  Fly   698 DAATDQNLLLTSDDDDVDDFDDEQSKHLQKPYCI-YCNKKFTSQYKFENHMFVHRGLAPYRCELC 761
            .|.|...|.:|.                :|.:|. .|:|||:::.....||.:|:|..|::|..|
Zfish   487 KAETSVGLTVTR----------------RKEFCCNLCDKKFSTKLTMRRHMGIHQGDKPFKCPHC 535

  Fly   762 TNLYNMKRLLIKHYKTVHKRMPTRDMVQAKGDKVSVARTNIEKLYPGRIKNPMLMCAKCPFECES 826
            .....:|..||:|.: :|..                     ||.|         .|.:|.:....
Zfish   536 HYCTRLKASLIQHLR-IHTG---------------------EKPY---------KCLQCSYASID 569

  Fly   827 DSEMRKHLNAHHGINDGVSEHANEVFIIRKLPFECPRCIRSFAAKTTLSRHLQRSHLVDT----I 887
            .|.:|:|...|                .::.|:.|..|..|...|..|..|.:|.|..::    :
Zfish   570 RSSLRRHSRTH----------------TQEKPYCCQYCPYSSIQKKCLDLHSRRHHTGESFPCHL 618

  Fly   888 IEMQTP------------HCGE 897
            .:..||            |.||
Zfish   619 CQYSTPDRQLLVRHMRKHHTGE 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..106 CDD:285071
C2H2 Zn finger 369..389 CDD:275368 5/19 (26%)
C2H2 Zn finger 397..418 CDD:275368 6/20 (30%)
C2H2 Zn finger 442..460 CDD:275368 3/17 (18%)
C2H2 Zn finger 730..750 CDD:275368 7/20 (35%)
C2H2 Zn finger 758..777 CDD:275368 6/18 (33%)
C2H2 Zn finger 1089..1110 CDD:275368
C2H2 Zn finger 1124..1144 CDD:275368
C2H2 Zn finger 1151..1172 CDD:275368
C2H2 Zn finger 1180..1203 CDD:275368
C2H2 Zn finger 1210..1230 CDD:275368
C2H2 Zn finger 1238..1254 CDD:275368
si:dkey-154p10.3XP_692110.2 C2H2 Zn finger 275..295 CDD:275368 5/19 (26%)
C2H2 Zn finger 303..323 CDD:275368 6/21 (29%)
C2H2 Zn finger 334..350 CDD:275368 3/16 (19%)
COG5048 <500..632 CDD:227381 38/178 (21%)
C2H2 Zn finger 504..524 CDD:275368 6/19 (32%)
zf-H2C2_2 517..539 CDD:290200 7/21 (33%)
C2H2 Zn finger 532..552 CDD:275368 6/20 (30%)
C2H2 Zn finger 560..580 CDD:275368 5/19 (26%)
zf-H2C2_2 572..594 CDD:290200 6/37 (16%)
C2H2 Zn finger 588..608 CDD:275368 6/19 (32%)
C2H2 Zn finger 616..636 CDD:275368 2/19 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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