DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and CG6791

DIOPT Version :9

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_650090.1 Gene:CG6791 / 41391 FlyBaseID:FBgn0037918 Length:1243 Species:Drosophila melanogaster


Alignment Length:1290 Identity:243/1290 - (18%)
Similarity:381/1290 - (29%) Gaps:535/1290 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 QPHPHIDNDQLRDIDHQLAVSMDEP-----VPSVDSLTSTLPPMDTPNVSIGTEYLVLPDGSLQQ 298
            ||.|  |:|.|.|.:.:..|.:.||     .|:........|||...:         .|....:.
  Fly    79 QPDP--DDDALFDFNMEPIVDIAEPQRPSLAPAGPMSQQVRPPMQRHS---------FPGAGGRP 132

  Fly   299 VNGSGVVIEYIDDSKPNSSSNVNVSLQNLLSSHNDPMDIDVN-ELIVEEMMP----QIRIKPKPA 358
            ..|||:.:      :| ::|.:|.:.:|         .:.:| ||.|..:.|    :.|.:....
  Fly   133 RLGSGLSV------RP-TTSQINATDEN---------GVPINYELGVVYICPACGGEFRQQDHWK 181

  Fly   359 VIGTSIHKH----------------KCKFCPKTFSTVAR--LKSHQLTHSNLPKFFCDQCDF--- 402
            .....|||:                :|:.|.|..:..:|  |..|:.||  || |.|.:|..   
  Fly   182 RHMNHIHKYNTLRGLNFTPLDKLYQRCRECNKRIAMHSRENLLKHKFTH--LP-FRCTKCYICKR 243

  Fly   403 -YSLRSADLIQHYKMVHHRVDENGKTGKE--QAQGIESRVYSCDMCLFETSTVSQLRTHY----- 459
             |..|. ||:.|.:|||  .||.....:|  .|.|.::||.       |:.|...||...     
  Fly   244 EYKYRQ-DLMVHLRMVH--CDEVVAMMREGYNAAGRKTRVR-------ESRTEQLLREKSFREND 298

  Fly   460 ---KERHTVQPTEVQLRP----SWTGEPTTTRGVAAKQQTPAKILNHTDIPLGIKYPPGVLETQA 517
               :|...::.....|.|    |.|.|.|.:..|:.|:             .|.:   |..|   
  Fly   299 DLGEESDRIEVRNELLEPDADESGTQEQTVSEEVSKKK-------------AGTR---GAAE--- 344

  Fly   518 PLPQPVVHQPMPDPMQQTEPMATTSTTITESGDINVVVDATPLFYAATSNSLLVTNPAPVTTVEE 582
             |.:..:|...||.....:..|..|..|....|   .|....|.:.:....:.......:.| ..
  Fly   345 -LCEDYIHYMCPDCGTDCDTHAQWSQHIEFVHD---YVSRRGLNFRSVDMQMQCLECKKIVT-PN 404

  Fly   583 TTGTASNHAFGIFPEISEGNLPVNEAVQQAPANSSSVSVFGDMQDFIDNTDVAAICTIPADGMPV 647
            |..:...|.|        .:|...|.::                           |.:...|  .
  Fly   405 TIKSLRAHKF--------SHLSQPEWLR---------------------------CKLCYKG--Y 432

  Fly   648 VDGDDIVIDNNNISLDFDAENLF-EDFEEEEDDTVADEEDEADNEDEN-DNNDAATDQNL----- 705
            .|..:|:   .::......:.|. ||.|||:.|..:..|||.|.::.| :.|.|..|::.     
  Fly   433 TDHQEII---RHLLQQHHMDTLMSEDAEEEDGDAPSAIEDECDGDNGNGEGNGAPLDEDSPYFED 494

  Fly   706 ------LLTSDD---------------------------------DDVDDFDDEQSKHLQKPYCI 731
                  .::|||                                 :|:...:.|.....|.. |.
  Fly   495 APRRGGRISSDDIFEPHIDYLCPQCGKEFIEKKHWRTHVVMAHSMNDLSKLNFEMINERQLK-CT 558

  Fly   732 YCNKKFTSQYKFEN---HMFVHRGLAPY-RCELCTNLYNMKRLLIKHYKTVHK------------ 780
            .|:|..|:.|..:|   |...|.....| ||..|...|..::.|:||..|.|:            
  Fly   559 ECDKIITNAYGIQNAQQHRITHLPFKAYARCRKCHKSYTDRKGLVKHLATHHRVGWPRKLSGGCP 623

  Fly   781 -------RMPTRDMV------------------------------QAKGD--------------- 793
                   :.|.:.:|                              ||:.|               
  Fly   624 APILTPAKQPRKQIVTVANETYEIIYLDDVDQGGMEEDNDFGEQMQAEEDEYPIAPPPPSPPPPP 688

  Fly   794 --------------------------KVSVARTNIEKLYPGRIKNPML----------------M 816
                                      :|.::.....|....|.:.|::                :
  Fly   689 QPTTQGNHQRYKCVHCGTLFATQAAVRVHISEKRCRKTVVRRRRQPVMSSADPSVPTVEQNYIFL 753

  Fly   817 CAKCPFECESDSEMRKHLNAHHGIN-----------------------------DGVSEHANEVF 852
            |..|.||.::..|.|:|:|..|..:                             .|:.:|.    
  Fly   754 CPSCGFEYKTQFEWRRHINEVHNFDKRQYLNMRQLDKYRYQCTQCKDIVCNSKLKGLQDHH---- 814

  Fly   853 IIRKLPF----ECPRCIRSFAAKTTLSRHLQRSHLVDTIIEMQTPHCGEAITTTMATSSSTISEP 913
             .|.||:    :|..|...:..|..::.||:..|   :|.:.:||        ||.|        
  Fly   815 -FRHLPYRLYLKCLICGTCYNHKPNIAAHLRARH---SIFDRETP--------TMIT-------- 859

  Fly   914 VNSVTVDGQHNEMMQTDVGAEKMTEALGNGDGNEEGGTDDGTGVKAEPAVPEEELDPVTLDAATA 978
                                 |..:.||....|.          :..|.:|    .|....|...
  Fly   860 ---------------------KPKQVLGRYKDNS----------RENPKLP----SPPPAPALAP 889

  Fly   979 VTTTAIAAAISAAAAATATSLESPVATTASSSTTLFPTPTPFDFDYDIMRDEAQQSSPNIHDVSK 1043
            ...:..|.:.||||:|::.||:                |.|                        
  Fly   890 APPSPPACSSSAAASASSRSLK----------------PQP------------------------ 914

  Fly  1044 ALSDNASSSCPINESYKLLSTTALETSPAKGLRS--NSRLHRSSI------HICKLCNQTFDELG 1100
                                 ..|...|| ||.:  :|..:.:::      :.|..|||.||...
  Fly   915 ---------------------GGLPARPA-GLNTLEDSISYHNAVDLDFITYFCPKCNQNFDSHA 957

  Fly  1101 KLVKHEMELHSNTERSRWGYQ------HKCAICNTSYRTLTLLKFHMKRHSNRKSQCKLCPKSFV 1159
            ...||.:|.|:...|....::      :.|..|   |:.:|:.  |.|.                
  Fly   958 FWRKHIVEQHNFNSREGLNFRQIDNHHYLCLEC---YKRVTVT--HTKG---------------- 1001

  Fly  1160 TIAELERHTKAKHSKDKTLRCFMDG---CRKTFAFKH---HLIRHQKASH-------------LS 1205
            .|.:|:.| |.:|...::.:|...|   .||...|||   ...|.....|             ||
  Fly  1002 AIGQLQSH-KFRHLPHRSFKCLTCGGEFVRKQMFFKHLNRDTNRCDNRPHREFDDDEPDQDTLLS 1065

  Fly  1206 TRY--ICPVC-------NKEEKSNVHLKNHMSVHK---------GEITYKCPKCD 1242
            |.|  .||.|       ||:|... |:.:|..:.|         ||..|:|..||
  Fly  1066 TIYHLTCPQCGDNFKTHNKKEWRE-HINDHHGLTKLELLHMTKVGEDVYRCQDCD 1119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..106 CDD:285071
C2H2 Zn finger 369..389 CDD:275368 6/21 (29%)
C2H2 Zn finger 397..418 CDD:275368 8/24 (33%)
C2H2 Zn finger 442..460 CDD:275368 4/25 (16%)
C2H2 Zn finger 730..750 CDD:275368 7/22 (32%)
C2H2 Zn finger 758..777 CDD:275368 6/18 (33%)
C2H2 Zn finger 1089..1110 CDD:275368 9/20 (45%)
C2H2 Zn finger 1124..1144 CDD:275368 6/19 (32%)
C2H2 Zn finger 1151..1172 CDD:275368 4/20 (20%)
C2H2 Zn finger 1180..1203 CDD:275368 8/28 (29%)
C2H2 Zn finger 1210..1230 CDD:275368 8/26 (31%)
C2H2 Zn finger 1238..1254 CDD:275368 3/5 (60%)
CG6791NP_650090.1 C2H2 Zn finger 167..188 CDD:275368 2/20 (10%)
C2H2 Zn finger 208..230 CDD:275368 6/21 (29%)
C2H2 Zn finger 235..256 CDD:275368 7/21 (33%)
C2H2 Zn finger 516..532 CDD:275368 0/15 (0%)
C2H2 Zn finger 557..580 CDD:275368 7/22 (32%)
C2H2 Zn finger 589..609 CDD:275368 6/19 (32%)
COG5236 <939..>1096 CDD:227561 43/179 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440046
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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