DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and pzg

DIOPT Version :9

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_001262143.1 Gene:pzg / 40351 FlyBaseID:FBgn0259785 Length:996 Species:Drosophila melanogaster


Alignment Length:869 Identity:162/869 - (18%)
Similarity:267/869 - (30%) Gaps:304/869 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 EPVPSVDSLTSTLPPMDTPN---VSIGTEYLVLPDGSLQQVNGSGVVIEYIDDSKPNSSSNVNVS 323
            ||..|:..:.:|......||   ..:|..:||:..|.....:....::.|.|..: |....|..:
  Fly    91 EPQTSLTDMCTTHTSTKFPNKLAQLVGEGFLVIVCGEDYVCSRCTNLVNYYDRLE-NDVERVKTN 154

  Fly   324 LQNLLSSHNDPMDIDVNELIVEEMMPQIRIKPKPAVIGTSIHKHKCKFCPKTFSTVARLKSHQLT 388
            |.:||:.     ...:||.:.:|..|.::::   .::|.|.::                   .|.
  Fly   155 LISLLNK-----KYAINEDMGQEGSPPLKMQ---KMVGGSANR-------------------SLE 192

  Fly   389 HSNLPKFFCDQCDFYSLRSADLIQHYKMVHHRVDENGK----TGKEQAQGIE------SRVYSCD 443
            .|               .||||::..|::........|    |.:...||.:      :::|.|.
  Fly   193 ES---------------PSADLLRPRKLLQGNPVGQSKIAPGTTQSSVQGTQTVQRKATKIYKCT 242

  Fly   444 MCLFETSTVSQLRTHYKERHTVQPTEVQLRPSWTGEPTTTRGVAAKQQ-----TPAKILNHTDIP 503
            .|.::||.:....|||:                          ..|||     |..||..|.   
  Fly   243 SCDYKTSDMRLFNTHYE--------------------------TCKQQTFQCKTCRKIFPHF--- 278

  Fly   504 LGIKYPPGVLETQAPLPQPVVHQPMPDPMQQTEPMATTSTTITESGDINVVVDATPLFYAATSNS 568
                         ..:.|.:|.                        |.|..:|.|...       
  Fly   279 -------------GAMKQHMVR------------------------DHNTAMDNTCAM------- 299

  Fly   569 LLVTNPAPVTTVEETT---GTASNHAFGIFPEISEGNLPVNEAVQQAPANSSSVSVFGDMQDFID 630
                  ..:..|.|.:   ...:|||                                      .
  Fly   300 ------CHINFVNENSLRKHMETNHA--------------------------------------T 320

  Fly   631 NTDVAAICTIPADGMPVVDGDDIVIDNNNISLDFDAENLFEDFEEEEDDTVADEEDEADNEDEND 695
            |..|.:..||||...||........                                        
  Fly   321 NVLVTSTTTIPASAAPVAAAAAAAA---------------------------------------- 345

  Fly   696 NNDAATDQNLLLTS---------DDDDVDDFDDEQSKHL---QKPY-CIYCNKKFTSQYKFENHM 747
               ||.::||:.||         ...|...||:...||.   .||: |..|:::|.::.....|.
  Fly   346 ---AAANENLVGTSLYTCNHCQFKSTDKVVFDEHMRKHAAGKPKPFKCRLCSQRFETREAATVHA 407

  Fly   748 FVHRGLAPYRCELCTNLYNMKRLLIKHYKTVHKRMPTRDMVQAKGDKVSVART-NIEKLYPGRIK 811
            ..|: ...::|..|:..:..:.:|:||:: || :.|:...|   ..|.||::. |.:||....|.
  Fly   408 KQHQ-TNFFKCGTCSMTFPKREMLVKHFE-VH-QSPSASTV---SPKQSVSQNLNTQKLLQETID 466

  Fly   812 NPMLMCAKCPFECESDSEMRKHLNAHHGINDGVSEHANEVFIIRKLPFECPRCIRSFAAKTTLSR 876
                       |..|||     |.|........:|..|.:..     |.|..|..:|..:|..:.
  Fly   467 -----------EALSDS-----LPASTAAVVATTESENNIRF-----FSCSICSLTFIQETYYNH 510

  Fly   877 HLQRSHLVDTIIEMQTPHCGEAITTTMATSSSTISEPVNSVTVDGQHNEMMQTDVGAEKMTEALG 941
            |:: :|..|    .:....|.....:.||:..: .||..:....|..:.....:...|.:.|.| 
  Fly   511 HME-THRRD----KKATSAGATALNSAATALLS-DEPGEATGKAGDESGEQNAEADIESLFEKL- 568

  Fly   942 NGDGNEEG-----GTDDGT----------GVKAEPAVPEEELDPVTLDAATAVTTTAIAAAI--- 988
            :.|.||.|     |:..|.          |:.....:|:.:.|....|:..  ||..::.:|   
  Fly   569 HSDKNESGEAPKPGSKGGEMVITSQEGSGGITFNITIPQPDGDQSQKDSPN--TTAPVSVSIDMP 631

  Fly   989 --------SAAAAATATSLESPVATTASSSTTLFPTPTP-FDFDYDIMRDEAQQSSPNIHDVSKA 1044
                    |.:..:.....||..|::|.|.:...|...| .|.|.:....|| ::|......|||
  Fly   632 NLDQAEDESQSQGSIDAKGESGEASSADSKSNAAPVSMPSLDDDNEAAAAEA-EASEETKTASKA 695

  Fly  1045 LSDNASSSCPINESYKLLSTTALE 1068
            ..:.|.:..  .||.|.....|.|
  Fly   696 GQEKAKAKA--GESAKSKEAAAAE 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..106 CDD:285071
C2H2 Zn finger 369..389 CDD:275368 1/19 (5%)
C2H2 Zn finger 397..418 CDD:275368 5/20 (25%)
C2H2 Zn finger 442..460 CDD:275368 6/17 (35%)
C2H2 Zn finger 730..750 CDD:275368 4/19 (21%)
C2H2 Zn finger 758..777 CDD:275368 5/18 (28%)
C2H2 Zn finger 1089..1110 CDD:275368
C2H2 Zn finger 1124..1144 CDD:275368
C2H2 Zn finger 1151..1172 CDD:275368
C2H2 Zn finger 1180..1203 CDD:275368
C2H2 Zn finger 1210..1230 CDD:275368
C2H2 Zn finger 1238..1254 CDD:275368
pzgNP_001262143.1 C2H2 Zn finger 241..263 CDD:275371 7/47 (15%)
C2H2 Zn finger 268..289 CDD:275371 6/60 (10%)
C2H2 Zn finger 297..318 CDD:275371 2/33 (6%)
C2H2 Zn finger 360..380 CDD:275368 3/19 (16%)
zf-H2C2_2 373..399 CDD:290200 9/25 (36%)
zf-C2H2_8 375..443 CDD:292531 17/70 (24%)
C2H2 Zn finger 390..410 CDD:275368 4/19 (21%)
C2H2 Zn finger 417..437 CDD:275368 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440016
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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