DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and pzg

DIOPT Version :10

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_649297.1 Gene:pzg / 40351 FlyBaseID:FBgn0259785 Length:996 Species:Drosophila melanogaster


Alignment Length:869 Identity:162/869 - (18%)
Similarity:267/869 - (30%) Gaps:304/869 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 EPVPSVDSLTSTLPPMDTPN---VSIGTEYLVLPDGSLQQVNGSGVVIEYIDDSKPNSSSNVNVS 323
            ||..|:..:.:|......||   ..:|..:||:..|.....:....::.|.|..: |....|..:
  Fly    91 EPQTSLTDMCTTHTSTKFPNKLAQLVGEGFLVIVCGEDYVCSRCTNLVNYYDRLE-NDVERVKTN 154

  Fly   324 LQNLLSSHNDPMDIDVNELIVEEMMPQIRIKPKPAVIGTSIHKHKCKFCPKTFSTVARLKSHQLT 388
            |.:||:.     ...:||.:.:|..|.::::   .::|.|.::                   .|.
  Fly   155 LISLLNK-----KYAINEDMGQEGSPPLKMQ---KMVGGSANR-------------------SLE 192

  Fly   389 HSNLPKFFCDQCDFYSLRSADLIQHYKMVHHRVDENGK----TGKEQAQGIE------SRVYSCD 443
            .|               .||||::..|::........|    |.:...||.:      :::|.|.
  Fly   193 ES---------------PSADLLRPRKLLQGNPVGQSKIAPGTTQSSVQGTQTVQRKATKIYKCT 242

  Fly   444 MCLFETSTVSQLRTHYKERHTVQPTEVQLRPSWTGEPTTTRGVAAKQQ-----TPAKILNHTDIP 503
            .|.::||.:....|||:                          ..|||     |..||..|.   
  Fly   243 SCDYKTSDMRLFNTHYE--------------------------TCKQQTFQCKTCRKIFPHF--- 278

  Fly   504 LGIKYPPGVLETQAPLPQPVVHQPMPDPMQQTEPMATTSTTITESGDINVVVDATPLFYAATSNS 568
                         ..:.|.:|.                        |.|..:|.|...       
  Fly   279 -------------GAMKQHMVR------------------------DHNTAMDNTCAM------- 299

  Fly   569 LLVTNPAPVTTVEETT---GTASNHAFGIFPEISEGNLPVNEAVQQAPANSSSVSVFGDMQDFID 630
                  ..:..|.|.:   ...:|||                                      .
  Fly   300 ------CHINFVNENSLRKHMETNHA--------------------------------------T 320

  Fly   631 NTDVAAICTIPADGMPVVDGDDIVIDNNNISLDFDAENLFEDFEEEEDDTVADEEDEADNEDEND 695
            |..|.:..||||...||........                                        
  Fly   321 NVLVTSTTTIPASAAPVAAAAAAAA---------------------------------------- 345

  Fly   696 NNDAATDQNLLLTS---------DDDDVDDFDDEQSKHL---QKPY-CIYCNKKFTSQYKFENHM 747
               ||.::||:.||         ...|...||:...||.   .||: |..|:::|.::.....|.
  Fly   346 ---AAANENLVGTSLYTCNHCQFKSTDKVVFDEHMRKHAAGKPKPFKCRLCSQRFETREAATVHA 407

  Fly   748 FVHRGLAPYRCELCTNLYNMKRLLIKHYKTVHKRMPTRDMVQAKGDKVSVART-NIEKLYPGRIK 811
            ..|: ...::|..|:..:..:.:|:||:: || :.|:...|   ..|.||::. |.:||....|.
  Fly   408 KQHQ-TNFFKCGTCSMTFPKREMLVKHFE-VH-QSPSASTV---SPKQSVSQNLNTQKLLQETID 466

  Fly   812 NPMLMCAKCPFECESDSEMRKHLNAHHGINDGVSEHANEVFIIRKLPFECPRCIRSFAAKTTLSR 876
                       |..|||     |.|........:|..|.:..     |.|..|..:|..:|..:.
  Fly   467 -----------EALSDS-----LPASTAAVVATTESENNIRF-----FSCSICSLTFIQETYYNH 510

  Fly   877 HLQRSHLVDTIIEMQTPHCGEAITTTMATSSSTISEPVNSVTVDGQHNEMMQTDVGAEKMTEALG 941
            |:: :|..|    .:....|.....:.||:..: .||..:....|..:.....:...|.:.|.| 
  Fly   511 HME-THRRD----KKATSAGATALNSAATALLS-DEPGEATGKAGDESGEQNAEADIESLFEKL- 568

  Fly   942 NGDGNEEG-----GTDDGT----------GVKAEPAVPEEELDPVTLDAATAVTTTAIAAAI--- 988
            :.|.||.|     |:..|.          |:.....:|:.:.|....|:..  ||..::.:|   
  Fly   569 HSDKNESGEAPKPGSKGGEMVITSQEGSGGITFNITIPQPDGDQSQKDSPN--TTAPVSVSIDMP 631

  Fly   989 --------SAAAAATATSLESPVATTASSSTTLFPTPTP-FDFDYDIMRDEAQQSSPNIHDVSKA 1044
                    |.:..:.....||..|::|.|.:...|...| .|.|.:....|| ::|......|||
  Fly   632 NLDQAEDESQSQGSIDAKGESGEASSADSKSNAAPVSMPSLDDDNEAAAAEA-EASEETKTASKA 695

  Fly  1045 LSDNASSSCPINESYKLLSTTALE 1068
            ..:.|.:..  .||.|.....|.|
  Fly   696 GQEKAKAKA--GESAKSKEAAAAE 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..103 CDD:214871
C2H2 Zn finger 369..389 CDD:275368 1/19 (5%)
C2H2 Zn finger 397..418 CDD:275368 5/20 (25%)
C2H2 Zn finger 442..460 CDD:275368 6/17 (35%)
C2H2 Zn finger 730..750 CDD:275368 4/19 (21%)
C2H2 Zn finger 758..777 CDD:275368 5/18 (28%)
C2H2 Zn finger 1089..1110 CDD:275368
C2H2 Zn finger 1124..1144 CDD:275368
C2H2 Zn finger 1151..1172 CDD:275368
C2H2 Zn finger 1180..1203 CDD:275368
C2H2 Zn finger 1210..1230 CDD:275368
C2H2 Zn finger 1238..1254 CDD:275368
pzgNP_649297.1 C2H2 Zn finger 241..263 CDD:275371 7/47 (15%)
C2H2 Zn finger 268..289 CDD:275371 6/60 (10%)
C2H2 Zn finger 297..318 CDD:275371 2/33 (6%)
C2H2 Zn finger 360..380 CDD:275368 3/19 (16%)
zf-H2C2_2 373..399 CDD:463886 9/25 (36%)
C2H2 Zn finger 390..410 CDD:275368 4/19 (21%)
C2H2 Zn finger 417..437 CDD:275368 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.

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