DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and Zfp462

DIOPT Version :9

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:XP_038966959.1 Gene:Zfp462 / 362522 RGDID:1562123 Length:2565 Species:Rattus norvegicus


Alignment Length:1705 Identity:326/1705 - (19%)
Similarity:502/1705 - (29%) Gaps:651/1705 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DPISGAEVDYKLSCRCCLKTNVEYVKL-DSVSVARSLDPADATEKIPLLRCLLFCVSADNAPELP 75
            :|:||       |.....:|.||:..: |...:|..|....||.          ..|.......|
  Rat    43 EPLSG-------SVNAGNQTEVEFSSIKDEFVIAEDLSGQSATA----------LGSGSYYGHSP 90

  Fly    76 ----QHI------------CLECSKSLQVAYYFLQNALRAHEILCRKLCPKVSKRLNGTLAQEQE 124
                |||            |..|     |.|:..:|.|..|           :::::|  ||.:|
  Rat    91 GYYGQHITPNPKPTNKFFQCKFC-----VRYFRSKNLLIEH-----------TRKVHG--AQAEE 137

  Fly   125 KPACAEPVQPLKTMRHECQVCGVVLYNRLELKQHIRQHAEGLS--YNCKLCSFTSLKQRTLFEHY 187
            .|. ..||.            |.:.||       |..| ||..  ::|:.|::.|.::..:.:|.
  Rat   138 SPT-GPPVP------------GSLNYN-------IMMH-EGFGKVFSCQFCTYKSPRRARIIKHQ 181

  Fly   188 VTMHNMPLSQAEEYVKSKHLPAPKEEEVKAVCTLED--MELLIPTVLRP--EDYVQP-------- 240
            ...|...|   :|.......|||..:.|....:|:|  .||....|.|.  |..|:|        
  Rat   182 KMYHKNSL---KESAAPPPAPAPLSDPVVPPVSLQDPCKELPAEVVERSILESMVKPLTKSRGNF 243

  Fly   241 --------HPHIDNDQLRDIDHQLA-----------VSMDEPVPSVDSLTSTLPPMDTPN---VS 283
                    .|..:    |..||.:.           :...:...:|..:.:...|..|.|   :|
  Rat   244 CCEWCSYQTPRRE----RWCDHMMKKHRSMVKILSNIRQQQEGTNVSEVQNNNEPSPTSNSTYLS 304

  Fly   284 IGTEYLVLPDGSLQQVNGSGVVIEYIDDS--KPNSSSNV----------------NVSLQNLLSS 330
            :......:|:.::....||      :.:|  :|||||..                |..|.||...
  Rat   305 MNAASREMPNTNVSNFRGS------VGNSIMRPNSSSTSKFSPMSYPQMKPKSPHNSGLVNLTER 363

  Fly   331 H--------NDPMDIDVNELIVEEMMPQIRIKPKPAVIGTSIHKHKCKFCPKTFSTVARLKSHQL 387
            .        |...|:|.|.::.:....: .:....:..|.|:..|:          .:.|.:.||
  Rat   364 SRYGMSDMTNSSADLDTNSMLNDSSSDE-DLNEVDSENGLSVMDHQ----------ASGLSAEQL 417

  Fly   388 THSN---------------LPKFFCDQCDFYSLRSADLIQHYKMVHHRVDENGKTGKEQAQGIES 437
            ..|:               :.:|.|..|.|.::....:.:|.:.:|    .:|||.         
  Rat   418 MGSDGNKLLETKGIPFRRFMNRFQCPFCPFLTMHRRSISRHIENIH----LSGKTA--------- 469

  Fly   438 RVYSCDMCLFETSTVSQLRTHYKERH-------TVQPTEVQL------------RPSWTGEPTTT 483
             ||.||.|.|...:..:|..| |:.|       ||......|            .||..|..:..
  Rat   470 -VYKCDECPFTCKSSLKLGAH-KQCHTGTSDWDTVNSQSESLSSSLNEGMLSYESPSINGRKSGV 532

  Fly   484 RGVAAKQQTPAKILNHTDIPLGIKYPPGVLETQAPLPQPVVHQPMPDPMQ-------QTEPMATT 541
            .....:||.|.:             ||..|....|.|...|.||.|..:|       |.:|...|
  Rat   533 MLDPLQQQQPPQ-------------PPPPLPPPPPPPSQPVQQPPPPQLQSPHQVPPQPQPPPPT 584

  Fly   542 STTITESGDINVVVDATPLFYAATSNSLLVTNPAPVTTVEETTGTAS--------NHAF-GIFPE 597
            ...       .......||            :|...|....:|.|..        .|:| ...|:
  Rat   585 QQP-------QPPTQVPPL------------HPYKCTMCSYSTMTLKGLRVHQQHKHSFCDNLPK 630

  Fly   598 ISEG---NLPVNEAVQQAPANSSSV-----SVFG--DMQDFIDNTDVAAICTIPADGMPVVDGD- 651
            . ||   :||:.......|::|::|     |:.|  ...:|:...........|.|..||.... 
  Rat   631 F-EGQPSSLPLENETDSHPSSSNTVKKSQTSILGLSSKNNFVAKASRKLANDFPLDLSPVKKRTR 694

  Fly   652 -DIVIDN-----NNISLDFDAENLFEDFEEEEDDTVADEEDEADNEDE----------------- 693
             |.:..|     |...|..||....||.||||||...:.|.|.|.|:|                 
  Rat   695 IDEIASNLQSKINQTKLQEDAIINVEDDEEEEDDNEVEIEVELDREEEPTEPIMDVPTAFSAQQI 759

  Fly   694 --NDNNDAATDQN-----------------LLLTSDDDDV------------------------- 714
              .|.:::..:.|                 |.|:.|::|.                         
  Rat   760 WARDTSESQKEANYRSITHDYTATNGAEIELTLSEDEEDYYGSSTSIKDHQVSNAALLNTQPPIY 824

  Fly   715 --------DDFDD------------------EQSKHLQK--PY-------------------CIY 732
                    .||.|                  ..|.|.|:  ||                   |:.
  Rat   825 GTEHSNENTDFGDSGRLYYCKHCDFNNKSARSVSTHYQRMHPYIKFSFRYILDPNDHSAVYRCLE 889

  Fly   733 CNKKFTS-----QYKFENH-------MFVHRGLAPYRCELCTNLYNMKRLLIKHYKTVHKRMPTR 785
            |...:|:     |:..|:|       .|.|..|. |||..|:......|.|:.||:.:|..:...
  Rat   890 CYIDYTNFEDLQQHYGEHHPEAMNVLNFDHSDLI-YRCRFCSYTSPNVRSLMPHYQRMHPTVKIN 953

  Fly   786 DMV--------QAKGDKVSVARTNIEKLYPGRIKN--PMLMCAKCPF------------------ 822
            :.:        |.:|       .|.|......|.|  |..|....|.                  
  Rat   954 NAMIFSSYVVEQQEG-------LNAESQTLREILNSAPKSMATSTPVARGGGMPATFNKNTSPKT 1011

  Fly   823 ---ECESDSEMRKHLNAHHGINDGVSEHANEVFIIRKLPFECPRCIRSFAAKTTLSRHLQRSHLV 884
               |||:..:                ...|.|.:     ::|..|  |||:          .::.
  Rat  1012 FTPECENQKD----------------PSVNTVVV-----YDCDVC--SFAS----------PNMH 1043

  Fly   885 DTIIEMQTPHCGEAITTTMATSSSTISEPVNSVTVD-GQHNEMMQTDVGAEKMTEALGNGDGNEE 948
            ..::..|..|..|      ..|...|.:.:..|:|| |.....:..:||| .|:..:.|      
  Rat  1044 SVLVHYQKKHPEE------KASYFRIQKTMRMVSVDRGSALAQLSFEVGA-PMSPKMSN------ 1095

  Fly   949 GGTDDGTGVKAEPAVPEEELD-------------------------PVTLDAATAVTTTAIAAAI 988
                .|:....:|..|:..::                         |.....|..:......||:
  Rat  1096 ----MGSPPPPQPPPPDLSIELYYCKHCSYSNRSVVGVLVHYQKRHPEIKVTAKYIRQAPPTAAM 1156

  Fly   989 SAAAAATATSLESPV---ATTASSSTTLFPTPTPFDF----DYD--------IMRDEAQQSSPNI 1038
            ...|.....|...|.   ...:||.....|..|...|    ||.        |...:..:.....
  Rat  1157 MRGAEGLQDSPRPPAPMQLNRSSSERDCPPVETEMFFCQHCDYGNRTVKGVLIHYQKKHRDFKAN 1221

  Fly  1039 HDVSKALSDNASSSCPINESYKLLSTTALETSPAKGL-RSNSRLHRSSIHICKLCNQTFDELGKL 1102
            .||.:..:....|.|..|:  |..|...|   ||.|: |..::|....   |:.|:.|......|
  Rat  1222 ADVIRQHTATIRSLCDRNQ--KPASCVLL---PASGMERDKTKLRALK---CRQCSYTSPYFYAL 1278

  Fly  1103 VKHEMELH-----SNTERSRWGY-------QHKCAICNTSYRTLT-LLKFHMKRHSN-------- 1146
            .||..:.|     :.|...||.:       .:.|..|..|:...: ||..:.:||..        
  Rat  1279 RKHIKKDHPALKATVTSIMRWAFLDGLIEAGYHCEWCIYSHMEPSGLLLHYQRRHPEHYVDYTYM 1343

  Fly  1147 ---------------------RKSQCKLCPKSFVTIAELERHTKAKHS--------------KDK 1176
                                 :..:|:.|....|:|.::..|.:|.|.              |:|
  Rat  1344 ATKLWAGPDPSSPTLTMSAEAKTYRCRDCAFEAVSIWDITNHYQAFHPWAMNGDESVLLDIIKEK 1408

  Fly  1177 TLRCFMDGCRKTFAFKHHLI--------------------------RHQKASHL--------STR 1207
                  ||..|.......||                          ..:|:.||        ||.
  Rat  1409 ------DGVDKALLAPEELIGAVNCENSLPNPLPEQEAECPEDARLSPEKSIHLASANPAISSTP 1467

  Fly  1208 YICPVCNKEEKSNVH-LKNH------------------MSVHKGEITYKCPKCDRSYLRRGRLVT 1253
            |.|.|| :.|.:|:| |..|                  :.::.|.: |||..|.....|...::|
  Rat  1468 YQCTVC-QSEYNNLHGLLTHYGKKHPGMKVKAADFAQDVDINPGAV-YKCRHCPYINTRIHGVLT 1530

  Fly  1254 HALIIHD-LRFTTEE 1267
            |....|. ::.|.|:
  Rat  1531 HYQKRHPAIKVTAED 1545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..106 CDD:285071 20/97 (21%)
C2H2 Zn finger 369..389 CDD:275368 3/19 (16%)
C2H2 Zn finger 397..418 CDD:275368 4/20 (20%)
C2H2 Zn finger 442..460 CDD:275368 6/17 (35%)
C2H2 Zn finger 730..750 CDD:275368 7/31 (23%)
C2H2 Zn finger 758..777 CDD:275368 6/18 (33%)
C2H2 Zn finger 1089..1110 CDD:275368 6/20 (30%)
C2H2 Zn finger 1124..1144 CDD:275368 5/20 (25%)
C2H2 Zn finger 1151..1172 CDD:275368 6/20 (30%)
C2H2 Zn finger 1180..1203 CDD:275368 6/48 (13%)
C2H2 Zn finger 1210..1230 CDD:275368 8/38 (21%)
C2H2 Zn finger 1238..1254 CDD:275368 3/15 (20%)
Zfp462XP_038966959.1 C2H2 Zn finger 2052..2072 CDD:275368
zf-H2C2_5 2084..2108 CDD:404746
C2H2 Zn finger 2086..2106 CDD:275368
C2H2 Zn finger 2115..2136 CDD:275368
C2H2 Zn finger 2144..2165 CDD:275368
C2H2 Zn finger 2315..2335 CDD:275368
C2H2 Zn finger 2361..2381 CDD:275368
C2H2 Zn finger 2389..2410 CDD:275368
C2H2 Zn finger 2475..2495 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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