DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and CG12942

DIOPT Version :10

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster


Alignment Length:752 Identity:149/752 - (19%)
Similarity:239/752 - (31%) Gaps:291/752 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   595 FPEIS-EGNLPVNEAVQQAPANSSSV-SVFGDMQDFIDNTDVAAICTIP-----ADGMPVVDGDD 652
            |.|:: |.||.:     ||.|.|..: |..|:::....|.      |||     .:....|:|.:
  Fly    88 FVEMALESNLKL-----QAEAKSVKLPSPTGELKRKASNE------TIPWNQFSQEFEQFVEGYE 141

  Fly   653 IVIDNNNI--------SLDFDAENLFEDFEEEEDDTVAD---EEDEADNEDENDNNDAATDQN-- 704
            ..|:.|.:        .||.||.:..|...:|::..:.|   :.::.:.|||||.:||..::.  
  Fly   142 GPIEENVLYMRGTKVPRLDVDASSSSETAPKEDEVILFDVKYDTNDLEEEDENDGSDAKNNETFF 206

  Fly   705 ----------LLLTSDDDDVD------------DFDDEQSKHLQKPYCIYCNKKFTSQ------- 740
                      ::::..:..|:            |..||:...:|:...:..|....||       
  Fly   207 ENSITPGESVMVVSVAEKAVENNNNYNFNNKNGDVTDEECDLIQRALEMTLNDDGCSQSPKNEAS 271

  Fly   741 ---------YKFENHMFVH-------RGLAP-YRCELCTNLYNMKRLLIKHYKTVHKRMPTRDMV 788
                     .:..:.:|:.       .|..| .:|.:|...:.....|..|||::|         
  Fly   272 NETQLKSNGIEVSSPLFIKLATTSSTTGNIPILKCNICQYTHTDAEQLKIHYKSIH--------- 327

  Fly   789 QAKGDKVSVARTNIEKLYPGRIKNPMLMCAKC-PFECESDSEMRKHLNAHHGINDGVSE-----H 847
                 |:|:...:|    .|..||....|..| .:|.:..|||:|||..||.| ||..|     .
  Fly   328 -----KISMMEDDI----IGLNKNQNFKCRPCNSYETKDRSEMQKHLIDHHKI-DGDFEMYCYMQ 382

  Fly   848 ANEVFIIRKLPFECPRCIRSFAAKTTLSRHLQRSHLVDTIIEMQTPHCGEAITTTMATSSSTISE 912
            ||           ||.|.|.|..:.:..:|..|.|                              
  Fly   383 AN-----------CPACDRIFKDQRSARKHYTRVH------------------------------ 406

  Fly   913 PVNSVTVDGQHNEMMQTDVGAEKMTEALGNGDGNEEGGTDDGTGVKAEPAVPEEELDPVTLDAAT 977
                                                                             
  Fly   407 ----------------------------------------------------------------- 406

  Fly   978 AVTTTAIAAAISAAAAATATSLESPVATTASSSTTLFPTPTPFDFDYDIMRDEAQQSSPNIHDVS 1042
              |...||.:.:.:.|.||                                            ..
  Fly   407 --TPVQIAVSPTESYACTA--------------------------------------------CD 425

  Fly  1043 KALSDNASSSCPINESYKLLSTTALETSPAKGLRSNSRL--HRSSIHICKLCNQTFDELGKLVKH 1105
            |..:..||                        |.|:.|.  .:..:| |..|:|.|:.:.|...|
  Fly   426 KVFNQKAS------------------------LHSHQRFCQVKDVVH-CSFCDQQFNSMRKYELH 465

  Fly  1106 EMELHSNTERSRWGYQHKCAICNTSYRTLTLLKFHMKRHSNRKSQCKLCPKSFVTIAELERHTKA 1170
            ..:||:...      .|:|.||..|:::...|..|.||||.|..||..|..::|..|||..|.:.
  Fly   466 LQQLHAVET------VHECEICRRSFKSAETLTMHRKRHSERHYQCGKCSLNYVNSAELRVHYER 524

  Fly  1171 KHSKDKTLRCFMDGCRKTFAFKHHLIRHQKASHLSTR-YICPVCNKEEKSNVHLKNHMSVHKGEI 1234
            .|..::.:.|..  |...|.....|..|::.||..:: :.|.|||.|.|:....:.|...|. :.
  Fly   525 AHVNEEPVSCLT--CGNQFQNMTLLREHEQRSHQKSKVWRCEVCNFETKTRWRRRQHQYEHM-DY 586

  Fly  1235 TYKCPKCDRSYLRRGRLVTHALIIHDLRFTTEELGNL 1271
            .|||.||...:..|.:...|:..:|.:..:.|:|..:
  Fly   587 PYKCQKCTSEFADRSKFRQHSKKVHGIELSDEQLAEM 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..103 CDD:214871
C2H2 Zn finger 369..389 CDD:275368
C2H2 Zn finger 397..418 CDD:275368
C2H2 Zn finger 442..460 CDD:275368
C2H2 Zn finger 730..750 CDD:275368 4/35 (11%)
C2H2 Zn finger 758..777 CDD:275368 5/18 (28%)
C2H2 Zn finger 1089..1110 CDD:275368 6/20 (30%)
C2H2 Zn finger 1124..1144 CDD:275368 7/19 (37%)
C2H2 Zn finger 1151..1172 CDD:275368 7/20 (35%)
C2H2 Zn finger 1180..1203 CDD:275368 5/22 (23%)
C2H2 Zn finger 1210..1230 CDD:275368 7/19 (37%)
C2H2 Zn finger 1238..1254 CDD:275368 4/15 (27%)
CG12942NP_610628.2 zf-AD 21..100 CDD:462262 5/16 (31%)
C2H2 Zn finger 385..406 CDD:275368 7/20 (35%)
C2H2 Zn finger 421..470 CDD:275368 15/117 (13%)
C2H2 Zn finger 449..466 CDD:275371 5/16 (31%)
C2H2 Zn finger 478..498 CDD:275368 7/19 (37%)
C2H2 Zn finger 505..526 CDD:275368 7/20 (35%)
C2H2 Zn finger 534..555 CDD:275368 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.

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