DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and kmg

DIOPT Version :10

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_609604.1 Gene:kmg / 34706 FlyBaseID:FBgn0032473 Length:747 Species:Drosophila melanogaster


Alignment Length:1064 Identity:190/1064 - (17%)
Similarity:303/1064 - (28%) Gaps:463/1064 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 VSADNAPELPQHICLECSKSLQVAYYFLQNALRAHEILCRKLCPKVSKRLNGTLAQEQEKPACAE 130
            ||||:||  |..:..|          .::|:|           |..:...|.   .:.|.|.|  
  Fly    75 VSADSAP--PGDLAKE----------NMENSL-----------PDGNPCNNN---NDDELPQC-- 111

  Fly   131 PVQPLKTMR-HECQVCGVVLYNRLELKQHIRQ-HAEGLSYN-CKLCSFTSLKQRTLFEHYVTMHN 192
                 |..| :.|..|.....|......|:|. |.|.:..| ||||.:.|...:.|..|...:|.
  Fly   112 -----KIRRNYSCNQCAFFTQNPRSHLSHLRDVHGERIVINECKLCLYASRHFQKLVRHMKMVHG 171

  Fly   193 MP------------------LS------QAEEYVKSKHLP--------------APKEEEVKAVC 219
            ..                  ||      :.||.::.:...              .|..|::|...
  Fly   172 CSDDGGAVQGSGAQPRGKRNLSREVRKRRLEESIEGQGATGQCLDLSVLRMIQNGPPLEQLKVEL 236

  Fly   220 TLEDMELL--IPTVLRPEDYVQPHPHIDNDQLRDIDHQLAVSMDEPVPSVDSLTSTLPPMDTPNV 282
            ..::|:||  :....|.::.:|....:::       |....||     :.:..|..:||....::
  Fly   237 QQQEMQLLASVQAYNRQQEMLQLQQIVES-------HDNIFSM-----AYEFQTKLMPPKQAESL 289

  Fly   283 SIGTEYLVLPDGSLQQVNGSGVVIEYIDDSKPNSSSNVNVSLQNLLSSHNDPMDIDVNELIVEEM 347
                        .|:|.|.|       .||:..:.|               |.. |..||:    
  Fly   290 ------------KLEQQNSS-------SDSEETAKS---------------PSP-DTRELV---- 315

  Fly   348 MPQIRIKPKPAVIGTSIHKHKCKFCPKTFSTVARLKSHQLTHSNLPKFFCDQCDFYSLRSADLIQ 412
                          :...:.:|:.|..:....||.|.|...|| :|...|..|||::....:|.:
  Fly   316 --------------SGKEQFQCQKCSYSTPIRARFKKHVKYHS-MPLIKCSSCDFHTPYKWNLDR 365

  Fly   413 HYKMVHHRVDENGKTGKEQAQGIESRVYSCDMCLFETSTVSQLRTHYKERHTVQPTEVQLRPSWT 477
            |.|       .:|..|.          :.|..|.|.|.....|..|....|              
  Fly   366 HTK-------NHGANGH----------FKCSCCDFSTDIKQSLTIHESNHH-------------- 399

  Fly   478 GEPTTTRGVAAKQQTPAKILNHTDIPLGIKYPPGVLETQAPLPQPVVHQ-------PMPDPMQQT 535
                                                   .|:|   |||       ...|.:.|.
  Fly   400 ---------------------------------------VPMP---VHQMGNRSRDEAEDLVDQQ 422

  Fly   536 EPMATTSTTITESGDINVVVDATPLFYAATSNSLLVTNPAPVTTVEETTGTASNHAFGIFPEISE 600
            ...:....|....|       ||    .|::.|||          ..|:|...:|.         
  Fly   423 SSGSRKPETFKNGG-------AT----VASTESLL----------PRTSGIVCSHC--------- 457

  Fly   601 GNLPVNEAVQQAPANSSSVSVFGDMQDFIDNTDVAAICTIPADGMPVVDGDDIVIDNNNISLDFD 665
                     |:...|  ::.:...:|          :||:..              :|...|.  
  Fly   458 ---------QKRVGN--AMQLINHLQ----------VCTLAL--------------HNTTQLQ-- 485

  Fly   666 AENLFEDFEEEEDDTVADEEDEADNEDENDNNDAATDQNL--------------LLTSDDDDVDD 716
                            |....|.|..|| |..:|.||.:.              :|..:.:|:  
  Fly   486 ----------------ASINAEVDLHDE-DFPNAPTDLSYCGVETAPGYGEVTEVLPEEPEDL-- 531

  Fly   717 FDDEQSKHLQKPY-CIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIKHYKTVHK 780
                  ..|:|.: |.:|:....:..:|..|:..|....|:.|.||....|.:..:.||.:.  |
  Fly   532 ------APLKKVFKCPHCSFWAATASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIRL--K 588

  Fly   781 RMPTRDMVQAK---GDKVSVARTNIEKLYPGRIKNPMLMCAKCPFECESDSEMRKHLNAHHGIND 842
            .:..|...||:   .|:  ..|.|..|.      |..|...|...|..:||:         |:..
  Fly   589 ALRDRSHNQAQVLMNDE--TGRRNYAKY------NQYLTMMKVSAEQLADSK---------GMRT 636

  Fly   843 GVSEHANEVFIIRKLPFECPRCIRSFAAKTTLSRHLQRSHLVDT--IIEMQTPHCGEAITTTMAT 905
            |      |:.:   :|.|                .|...|.::|  ||||        :.:..:|
  Fly   637 G------EMIV---MPPE----------------KLDDHHPMETEEIIEM--------VDSAHST 668

  Fly   906 SSSTISEPVNSVTVDGQHNEMMQTDVGAEKMTEALGNGDGNEEGGTDDGTGVKAEPAVPEEELDP 970
            |:..:.:|.:..|.|                  ..||.|                 .:|:|    
  Fly   669 SALDLRKPRDDQTED------------------LAGNSD-----------------ELPQE---- 694

  Fly   971 VTLDAATAVTTTAIAAAISAAAAATATSLESPVATTASSSTTLFPTPTPFDFDYDIMRDEAQQSS 1035
                                 .|.|..:|| |::..:.:|:.:.|.|               :.|
  Fly   695 ---------------------GAKTEPNLE-PLSFKSLNSSQVMPKP---------------KGS 722

  Fly  1036 P-NIHDVSKALSDNASSSCPINES 1058
            | |:.......||..:|:...|||
  Fly   723 PMNLTKTDGGQSDETTSADESNES 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..103 CDD:214871 10/36 (28%)
C2H2 Zn finger 369..389 CDD:275368 6/19 (32%)
C2H2 Zn finger 397..418 CDD:275368 7/20 (35%)
C2H2 Zn finger 442..460 CDD:275368 6/17 (35%)
C2H2 Zn finger 730..750 CDD:275368 4/19 (21%)
C2H2 Zn finger 758..777 CDD:275368 6/18 (33%)
C2H2 Zn finger 1089..1110 CDD:275368
C2H2 Zn finger 1124..1144 CDD:275368
C2H2 Zn finger 1151..1172 CDD:275368
C2H2 Zn finger 1180..1203 CDD:275368
C2H2 Zn finger 1210..1230 CDD:275368
C2H2 Zn finger 1238..1254 CDD:275368
kmgNP_609604.1 C2H2 Zn finger 540..560 CDD:275370 4/19 (21%)
C2H2 Zn finger 568..586 CDD:275370 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

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