DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and zf30C

DIOPT Version :9

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster


Alignment Length:1017 Identity:186/1017 - (18%)
Similarity:297/1017 - (29%) Gaps:389/1017 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 IHKHKCKFCPKTFSTVARLKSHQLTHSNLPKFFCDQCDFYSLRSADLIQHYKMVHHRVDENG--- 425
            |.|..|..|.|...::|....|...|.....|.|..||.......:|.||.|      ||:|   
  Fly    28 IPKLHCPVCNKALVSLAGYVKHVKKHQPPGGFECRHCDARFCHEEELTQHAK------DEHGVTG 86

  Fly   426 -------------------------------KTGKEQAQGIESRVYSCDMCLFETSTVSQLRTHY 459
                                           |.|:|:....|||...|..|....|:.|.|..|.
  Fly    87 AVAGQERKPFVCEKCGAEYKYQEAYRRHCRTKCGEEKLPREESRPMECKCCYTRFSSASNLSKHR 151

  Fly   460 KERHTVQPTEVQLRPSWTGEPTTTRGVAAKQQTPAKILNHTDIPLGIKY-PPGVLETQAPLPQPV 523
            :.           ||...|:|                          :| .||            
  Fly   152 RS-----------RPDTCGQP--------------------------EYDSPG------------ 167

  Fly   524 VHQPMPDPMQQTEPMATTSTTITESGDINVVVDATPLFYAATSNSLLVTNPAPVTTVEETTGTAS 588
                ..|.|::.:........ .:|.|                              |:||...|
  Fly   168 ----SSDGMKKHKAFRKKDRN-RDSDD------------------------------EDTTSEES 197

  Fly   589 NHAFGIFPEISEGNLPVNEAVQQAPANSSSVSVFGD-MQDF-----IDNTDVAAICTIPADGMPV 647
                    |.|:.::|:...::......|..|..|| ..||     .|:.|.:.. .:|...|..
  Fly   198 --------EDSDDDIPLASRLKTKLKQESQNSDSGDECPDFEPNNSEDDADASGF-QLPPPAMVK 253

  Fly   648 VDGDDIVIDNNNISLDFDAENLFEDFEEEEDDTVADEEDEADNEDENDNNDAATDQNL------- 705
            |:..|        ..||:.::.....:.|..|..::|:|:..:...|:.:.....::|       
  Fly   254 VEAFD--------EEDFEYQDASMYVKTESTDIFSNEKDKLLDVLLNEGDGLKPFESLKVEQGAG 310

  Fly   706 ---------LLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELC 761
                     |:...::||.:....|   ::||         ....|        ||..|..    
  Fly   311 ILDEIAAVPLVEVAEEDVLELRGHQ---MEKP---------PGPRK--------RGRPPKE---- 351

  Fly   762 TNLYNMKRLLIKHYKTVHKRMPTRDMVQAKGDKVSVARTNIEKLYPGRIK--NPMLMCAKCPFEC 824
             .:..:||   |:.|....|.|:.|  .:.|....||:.:.::| ..|:|  |.|....||| .|
  Fly   352 -KIPVVKR---KYRKRNAPRSPSPD--DSSGTPKRVAKISKKEL-KERLKMINKMEKSWKCP-HC 408

  Fly   825 ESDSEMR----KHLNAHHGINDG-VSEHANEVFIIRKLP---FECPRCIRSFAAKTTLSRHLQRS 881
            .....:|    |||...|.:|:. :.|...:|.:..||.   |:||.|.:.:..:..|..|: :.
  Fly   409 VKIYHIRKPYEKHLRDDHKLNEAEMKEIFKDVDVHAKLDEEVFKCPICSKIYLVEKRLVTHM-KV 472

  Fly   882 HLVDTIIEMQTP-HCGEAITT-TMATSSSTISEPVNSVTVDGQHNEMMQTDVGAEKMT--EALGN 942
            |..|..:..:.| :|.....| ..||..:.           .||.|::..:...:.||  ::|.|
  Fly   473 HGEDGKLTFKCPCYCNLFFATKEQATEHAR-----------AQHKELLYCEKCDKYMTGHDSLKN 526

  Fly   943 GDGNEEGGTDDGTGVKAEPAVPEEELDPVTLDAATAVTTTAIAAAISAAAAATATSLESPVATTA 1007
            .:.|...        |.||...:..|                                       
  Fly   527 HERNFHS--------KKEPRSQQRNL--------------------------------------- 544

  Fly  1008 SSSTTLFPTPTPFDFDYDIMRDEAQQSSPNIHDVSKALSDNASSSCPINESYKLLSTTALETSPA 1072
                                                                             
  Fly   545 ----------------------------------------------------------------- 544

  Fly  1073 KGLRSNSRLHRSSIHICKLCNQTFDELGKLVKHEMELHSNTERSRWGY--QHKCAICNTSYRTLT 1135
                           ||..|.:.|.....|..|        .||..|.  .:.|::|.....|..
  Fly   545 ---------------ICDKCGKKFTGRTSLSDH--------VRSDCGRLPLYGCSVCGKHLSTAG 586

  Fly  1136 LLKFHMKRH-SNRKSQCKLCPKSFVTIAELERHTKAKHSKDKTLRCFMDGCRKTFAFKHHLIRHQ 1199
            :||.||..| ::...||..|.|:|...|:.:.|.|.:|:..|..:|.:  |.|.:.::..|:.|.
  Fly   587 ILKTHMLLHKADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYKCHL--CPKEYPYRESLLTHM 649

  Fly  1200 KASHLSTRYICPVCNKEEKSNVHLKNHMSVHK---GEITYKCPKCDRSYLRRGRLV--------- 1252
            .......|::|..|.|......:|:.|..||.   |::...........::||:|:         
  Fly   650 TVHTGIKRFLCNNCGKRFTCISNLQAHRKVHADTCGQLPLNAKATQYMGVQRGKLLMGAKPEAGM 714

  Fly  1253 ----THALIIHD-----------LRFTTEELGNLSSLATNQA 1279
                |..||..|           |.|.::....|:::..|.|
  Fly   715 EYEETKTLIAQDVIDRDMPMAQELNFPSDGSAPLATVPLNYA 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..106 CDD:285071
C2H2 Zn finger 369..389 CDD:275368 5/19 (26%)
C2H2 Zn finger 397..418 CDD:275368 7/20 (35%)
C2H2 Zn finger 442..460 CDD:275368 6/17 (35%)
C2H2 Zn finger 730..750 CDD:275368 1/19 (5%)
C2H2 Zn finger 758..777 CDD:275368 3/18 (17%)
C2H2 Zn finger 1089..1110 CDD:275368 5/20 (25%)
C2H2 Zn finger 1124..1144 CDD:275368 7/19 (37%)
C2H2 Zn finger 1151..1172 CDD:275368 7/20 (35%)
C2H2 Zn finger 1180..1203 CDD:275368 5/22 (23%)
C2H2 Zn finger 1210..1230 CDD:275368 5/19 (26%)
C2H2 Zn finger 1238..1254 CDD:275368 3/28 (11%)
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368 5/19 (26%)
C2H2 Zn finger 61..82 CDD:275368 8/26 (31%)
C2H2 Zn finger 98..117 CDD:275368 0/18 (0%)
C2H2 Zn finger 134..152 CDD:275368 6/17 (35%)
C2H2 Zn finger 511..532 CDD:275370 5/20 (25%)
COG5048 <523..>672 CDD:227381 43/285 (15%)
C2H2 Zn finger 546..566 CDD:275368 6/27 (22%)
C2H2 Zn finger 575..595 CDD:275368 7/19 (37%)
C2H2 Zn finger 603..624 CDD:275368 7/20 (35%)
C2H2 Zn finger 632..652 CDD:275368 5/21 (24%)
C2H2 Zn finger 660..680 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440036
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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