DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30020 and si:dkeyp-84f3.5

DIOPT Version :9

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_001313282.1 Gene:si:dkeyp-84f3.5 / 334144 ZFINID:ZDB-GENE-050208-162 Length:580 Species:Danio rerio


Alignment Length:459 Identity:92/459 - (20%)
Similarity:161/459 - (35%) Gaps:101/459 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   937 TEALGNGDGNEEGGTDDGTGVKAEPAVPEEELDPVTLDAATAVTT-------TAIAAAISAA--A 992
            |:.|..||...  .|:.|.|.:..|.:.|.    :.:...|.|.:       :::..:|..|  .
Zfish     8 TQELRGGDAFI--CTECGEGFRLYPKLVEH----MAIHGLTGVFSSDGISNGSSVNPSIEVALHE 66

  Fly   993 AATATSLESPVATTASSSTTLFPTPTPFDF-----DYDIMRDEAQQSSPNIHDVSK-ALSDNASS 1051
            ..|.|.::..|   .|:.|.||..|.|..|     ...|:..:..:..|.::...: ......|.
Zfish    67 NGTLTVVDRSV---LSNFTFLFGKPQPKRFCPPPSQETIVPSKMPEKEPALYKCDRCGQLFKTSK 128

  Fly  1052 SCPINESYKLLSTTALETSPAKGLRSNSRLH-------RSSIHICKLCNQTFDELGKLVKHEMEL 1109
            |..:::.|:.|......|...|.|.....|.       ....:.|..|.:.|.....|:.|:.:.
Zfish   129 SLHLHQQYRALEQGFKCTLCCKVLNDRESLQNHLQNHAHERFYSCGHCGKRFLRQDSLLSHQKQW 193

  Fly  1110 HSNT-----------ERSRWGYQHKCAICNTSYRTLTLLKFHMKRHS------------------ 1145
            |.:.           :.:.....:.|..|...:..|:.|:.|:..||                  
Zfish   194 HGSASSRILSRSQEDQENSMDRSYPCKSCGLRFFWLSDLQSHLNSHSRVNKSPNEVMQDQALGEE 258

  Fly  1146 NRK-------SQ-----CKLCPKSFVTIAELERHTKAKHS-----KD------KTLRCFMDGCRK 1187
            |||       ||     |.||.::|:..::|..|.|.:|.     ||      |..:.:....|.
Zfish   259 NRKIDDNSVISQFNEPCCGLCGQNFLNTSDLREHHKVEHPDEIEVKDSSVLPAKAKQQYHGVMRH 323

  Fly  1188 TFAFKHHLI----------RHQKASHLSTRYICPVCNKEEKSNVHLKNHMSVHKGEITYKCPKCD 1242
            ..|.:|..:          |..:|::....:.|..|::....:..|..||..|||.: :.|..|.
Zfish   324 MVAKQHKQLLRVNIKGKPKRINRATYTGKLFSCKHCHRVFVHSSSLSRHMRYHKGTL-HACVYCG 387

  Fly  1243 RSYLRRGRLVTHALIIH--DLRFTTEELGNLSSLATNQARPNDLKVATPVGLLDGRKDVSGASEE 1305
            |.:.:|..:..|..:.|  :|:..::|...:.. .|.......:|.:|.. ..||.::   ..||
Zfish   388 RHFPQRCDVTRHVAMYHASELQSKSQEESTMEH-ETGNGEQEPMKESTQT-TSDGEQE---DLEE 447

  Fly  1306 NGQP 1309
            ..||
Zfish   448 ENQP 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..106 CDD:285071
C2H2 Zn finger 369..389 CDD:275368
C2H2 Zn finger 397..418 CDD:275368
C2H2 Zn finger 442..460 CDD:275368
C2H2 Zn finger 730..750 CDD:275368
C2H2 Zn finger 758..777 CDD:275368
C2H2 Zn finger 1089..1110 CDD:275368 5/20 (25%)
C2H2 Zn finger 1124..1144 CDD:275368 5/19 (26%)
C2H2 Zn finger 1151..1172 CDD:275368 7/20 (35%)
C2H2 Zn finger 1180..1203 CDD:275368 5/32 (16%)
C2H2 Zn finger 1210..1230 CDD:275368 5/19 (26%)
C2H2 Zn finger 1238..1254 CDD:275368 4/15 (27%)
si:dkeyp-84f3.5NP_001313282.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.