DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and hang

DIOPT Version :9

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster


Alignment Length:1509 Identity:268/1509 - (17%)
Similarity:451/1509 - (29%) Gaps:522/1509 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LSCRCCLKTNVEYVKLDSVSVARSLDPADATEKIPLLRCLLFCVSADNAPELPQHICLEC----- 82
            ::||||.|....|...          .|...:|.               |:||:::|..|     
  Fly   711 MTCRCCNKYFSTYKNF----------MAHVRKKY---------------PQLPRNLCFNCLKMND 750

  Fly    83 SKSLQVAYYFLQNALRAHEIL-------CRKLCP--------------KVSKRLNGTLAQE---- 122
            ||:|.:::...:|.:....:|       ...:.|              .|:....|.:|..    
  Fly   751 SKALFISHLKKRNCINLFRVLNALRGKTTTVVVPIADDVADDGATGSIPVADAGAGVVAMNSPTV 815

  Fly   123 ------------QEKPACAEPVQPLKTMRHECQVCGVVLYNRLELKQHIR------QHAEGLSYN 169
                        .|:|......:.|....:||::|......:.|.:.|:.      |..:..|..
  Fly   816 TASGEVVTPGGGSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQ 880

  Fly   170 CKLCSFTSLKQRTLFEHYVTMHNMPLSQAEEYVKSKHLPAPKEEEVKAVCTLEDMELLIPTVLRP 234
            |..|............||..|..:                     |:..|...|.:|        
  Fly   881 CSFCGLDFADPVDRRRHYNNMDCI---------------------VRLRCMTCDAKL-------- 916

  Fly   235 EDYVQPHPHIDNDQLRDIDHQLAVSMD--------------EPVPSVDSL--------------- 270
            |.:.:...|:..|.|..:... |||.:              |..|...||               
  Fly   917 ETHQRFLDHVYQDHLGGVGGG-AVSDNASTTGSGMARSNSMEHSPGKRSLLGALGVGSSAEESRS 980

  Fly   271 TSTLPPM-DTPNVSIGTEYLVLPDGSLQQVNGSGVVIEYIDDSKPNSSSNVNVSLQNLLSSHNDP 334
            :|..||: .||.::.|           .||.|.|           ::|::...:.|   ||.|  
  Fly   981 SSAAPPLTSTPKLAGG-----------NQVGGGG-----------STSASAAAAAQ---SSAN-- 1018

  Fly   335 MDIDVNELIVEEMMPQIRIKPKPAVIGTSIHKHKCKFCPKTFSTVARLKSH-QLTHSN-LPKFF- 396
            .|....:......|||:                 |..|.:.::....:..| :..|.| ||:.: 
  Fly  1019 RDASAPKSQYFSRMPQV-----------------CPICGQQYNNYNNVLRHMESKHPNKLPETYK 1066

  Fly   397 CDQCDFYSLRSADLIQHYKMVH-HRVDENGKTGKEQAQGIESRVYSCDMCLFETSTVSQLRTHYK 460
            |.:|.....|.:.|.:|  |:: |.||:|..:|     |.|..|.:..:.|.:.||.:.    |.
  Fly  1067 CVRCGLGYPRISYLREH--MINVHGVDKNRHSG-----GFEYIVNADAVKLADGSTPNV----YT 1120

  Fly   461 ERHTVQPTEVQLRPSWTGEPTTTRGVAAKQQTPAKILNHTDIPLGIKYPPGVLETQAPLPQPVVH 525
            .|:.....::.         :.|.|                         |.|:.:...|..|..
  Fly  1121 GRYDYVMKDLM---------SITNG-------------------------GTLDDEEEEPGSVAK 1151

  Fly   526 QPMPDPMQQTEPMATTSTTITESGDINVVVDATPLFYAATSNSLLVTNPAPVTTVEETTGTASNH 590
            :...|.......:...::...|          .|:..|..||::.::|..      .:..|||| 
  Fly  1152 KMRLDDSSNNSSLVGVASQQKE----------CPICNAVFSNNIGLSNHM------RSHYTASN- 1199

  Fly   591 AFGIFPEISEGN--LPVNEAVQQAPANSSSVSVFGDMQDFIDNTDVAAICTIPADGMPVVDG--- 650
              .:...::..|  .|.:..:...||..|.:.|.|.|.:....|        ||:..|.:..   
  Fly  1200 --AVNAALAAANRMTPKSLTITATPATDSELGVGGTMSESAPAT--------PANVPPAMANQTP 1254

  Fly   651 -DDIVIDNNNISLDFDAENLFEDFEEEEDDTVADEEDEADNEDENDNNDAATDQNLLLTSDDDDV 714
             :..|...   |||..|:..|....                        ....|....:......
  Fly  1255 QEQAVFRR---SLDQAADRRFRRMR------------------------CRICQRRFSSKKSYRY 1292

  Fly   715 DDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLA--------PYRCELCTNLYNMKRLL 771
            ....|.|.:::|...|..||.:|..:...:.|:|...|.|        .:.|::|:.:|:.:..|
  Fly  1293 HMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGKAIKDEMIIKQFECDVCSIVYSSESEL 1357

  Fly   772 IKHYKTVHKRMPTR-------------DMVQAKGDKVSVARTNIEKLYPG--RIKNPM--LMCAK 819
            .:|.::|||.....             |.:...|...|....::..|..|  ....|:  ..|..
  Fly  1358 QQHKRSVHKLTSASASTSASTSSKIDDDSLMDDGKPTSSDLADLSTLAAGGSTASAPLYWYQCKY 1422

  Fly   820 CPFECESDSEMRKHLNAHHGI--NDGVSEHANEVFIIRKL--------------PFECPRCIRSF 868
            ||....::.::..|:|:|...  ||...:....|:..||.              |.||..|.:.|
  Fly  1423 CPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPNPAECSLCRKVF 1487

  Fly   869 AAKTTLSRHLQRSHLVDTIIEMQTPHCGEAITTTMATSSSTISEPVNSVTVDGQHNEMMQTDVGA 933
                 ..|.:..:|         ||.|..              :|:.|.....|.:..:.:...|
  Fly  1488 -----FDRQMHDNH---------TPTCNR--------------KPITSTGAHQQQDGQLHSHHTA 1524

  Fly   934 EKMTEALGNGDGNEEGGTD-----------DGTGVKAEPAVPEEELDPVTLDAATAVTTTAIAAA 987
            ::.......||.::|...|           ||.|                       ||..:|:.
  Fly  1525 KRTIFRHKTGDDDDEEDDDEQQQLEERANSDGNG-----------------------TTVGVASG 1566

  Fly   988 ISAAAAATATSLESP-VATTASSSTTLFPTPTPFDFDYDIMRDEAQQSSPNIHDVSKALSDNASS 1051
             |.|||.|:..:..| ||.|...:...         |.:......|:....::      .||   
  Fly  1567 -STAAAGTSLKIRIPEVACTICGARFT---------DQEHFSKHIQKHEQELY------VDN--- 1612

  Fly  1052 SCPINESYKLLSTTALETSPA-KGLRSNSRLHRSSIHICKLCNQTFDELGKLVKHEMELHSNTER 1115
              |:        ....:..|| .|.....|.:.:..:.|.||.:||.::..|..|.         
  Fly  1613 --PL--------AAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHR--------- 1658

  Fly  1116 SRWGYQ----------HKCAICNTSYRT-------LTLLKFH----------------------- 1140
             :|.::          ....:.|.::.|       :.|.:.|                       
  Fly  1659 -KWHFRGDSKQNPIDGEATQLTNNNHTTNNNNNNSMHLRELHAVGLMPNQQQQSLNNSCNSSMNH 1722

  Fly  1141 -----------MKRHSNRKSQCKLCPKSFVTIAELERHTKAKHSK-------------DKTLRCF 1181
                       |||  .|:.:|:.|..:|::...|.||....|..             |..|.| 
  Fly  1723 NNNSSSNRSKSMKR--KRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIVVDDHLTC- 1784

  Fly  1182 MDGCRKTFAFKHHLIRHQKASHLSTRYICP------VC----NKEEKSNVHLKNHMSVHKGEITY 1236
             ..|:..|..|...|.|:.|.....|..||      :|    :::||...|:.||:   |.|:. 
  Fly  1785 -RRCQLKFDTKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHL---KEEVI- 1844

  Fly  1237 KCPKCDRSYLRRGRLVTHALIIHDLRFTTEELGNLSSLATNQARPNDLKVATPVGLL-------- 1293
             .|...::.:.|...:..|....:...|...||..:......|...:...||....|        
  Fly  1845 -VPVATKAAIERTAAMESAAADANAAATLSALGEGAETEDQFAEKVEAAGATTTDKLTNPDEEDS 1908

  Fly  1294 -DGRKDVSGASEEN 1306
             |..:|.||..:::
  Fly  1909 DDLDEDSSGDDDDS 1922

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..106 CDD:285071 18/92 (20%)
C2H2 Zn finger 369..389 CDD:275368 3/20 (15%)
C2H2 Zn finger 397..418 CDD:275368 6/20 (30%)
C2H2 Zn finger 442..460 CDD:275368 3/17 (18%)
C2H2 Zn finger 730..750 CDD:275368 6/19 (32%)
C2H2 Zn finger 758..777 CDD:275368 5/18 (28%)
C2H2 Zn finger 1089..1110 CDD:275368 7/20 (35%)
C2H2 Zn finger 1124..1144 CDD:275368 6/60 (10%)
C2H2 Zn finger 1151..1172 CDD:275368 6/20 (30%)
C2H2 Zn finger 1180..1203 CDD:275368 7/22 (32%)
C2H2 Zn finger 1210..1230 CDD:275368 8/29 (28%)
C2H2 Zn finger 1238..1254 CDD:275368 2/15 (13%)
hangNP_001138204.1 zf-AD 80..154 CDD:285071
C2H2 Zn finger 1036..1057 CDD:275368 3/20 (15%)
C2H2 Zn finger 1067..1088 CDD:275368 6/22 (27%)
C2H2 Zn finger 1279..1298 CDD:275371 1/18 (6%)
C2H2 Zn finger 1308..1325 CDD:275371 4/16 (25%)
C2H2 Zn finger 1420..1440 CDD:275368 5/19 (26%)
C2H2 Zn finger 1450..1468 CDD:275368 3/17 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440026
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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