DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and CG11695

DIOPT Version :9

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_572732.1 Gene:CG11695 / 32106 FlyBaseID:FBgn0030316 Length:544 Species:Drosophila melanogaster


Alignment Length:506 Identity:98/506 - (19%)
Similarity:163/506 - (32%) Gaps:158/506 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   926 MMQTDVGAEKMTEALGNGDGNEEGGTDDGTGVKAE-PAVPEEELDPVTLDAATAVTTTAIAAAIS 989
            :|:..:|.:::.        .|....|:....||: ...||.::.|...|..........|::.|
  Fly    71 VMKKQLGLQQLK--------MEPFSEDEDADTKAQILCEPEIDVSPAAADNEECNEIDGDASSNS 127

  Fly   990 AAAAATATSLE-----SPV----------------ATTASSSTTLFPTPTPFDFDYDIMRDEAQQ 1033
            .:::...|||.     ||:                |..|.:.|.........|.|.:...|...:
  Fly   128 RSSSIRTTSLREMRLPSPIRRRMRLPRAVTAPKTQAVKAKARTKTHKAEADEDEDAEGEGDPESR 192

  Fly  1034 SSPNIHDVSKALSDNASSSCPI---NESYKLLSTTALETSPAKGLRSNSRLHRSSI--------- 1086
            || |..::...::.:....|.|   :|.:...:.          ::.:.|.|..|:         
  Fly   193 SS-NSREMDSYIALHGRLECCICGGDEQFPNFAE----------MKRHFRNHHQSLGYVVCCQRR 246

  Fly  1087 ---------HI----------CKLCNQTFDELGKLVKHEMELHSNTERSRWGYQHKCAICNTSYR 1132
                     |:          ||:|::..........|.:..|.|.:    .....|..|:..:.
  Fly   247 YKKRALYVDHLHMHNDPNYFRCKICSKQLVSRISYDVHMLRFHPNKD----DLSFACDQCSKRFS 307

  Fly  1133 TLTLLKFHMKRH-SNRKSQCKLCPKSFVTIAELERHTKAKHSKDKTLRCFM-DGCRKTFAFKHHL 1195
            ...||..|.:.| ..|..|||.|.:||.|..:|..|.:..|  |.....|: |.|...|..|.:|
  Fly   308 KQFLLTIHSRVHQQERNEQCKHCDRSFRTAVDLRLHMRRTH--DPAFVPFICDSCGAKFKTKQNL 370

  Fly  1196 IRHQKASH-----------------LS-------------------------------------- 1205
            :.|::..|                 ||                                      
  Fly   371 LVHKRTVHREGSQLPEVQCQECQVWLSDENSLRKHMYMHLDAASLRQWKCEQCGLEKGSRAKLAA 435

  Fly  1206 -TRY-------ICPVCNKEEKSNVHLKNHMSVHKGEITYKCPKCDRSYLRRGRLVTHALIIHDLR 1262
             .||       .|..|.||.||:..|:.|.:.|.|:..|:|..|:|::...|.:..|...:|   
  Fly   436 HIRYHHPKEYHKCTHCAKEFKSSRSLEEHTATHTGQDLYECAFCERTFKNSGNMHKHRRQMH--- 497

  Fly  1263 FTTEELGNLSSLATNQARPNDLKVATPVGLLD----GRKDVS---GASEEN 1306
                 ...:::|...:..|...:......|||    |.||:|   ||.:.|
  Fly   498 -----AAQVAALQQQKKVPPSKRKDKGDLLLDVLAAGGKDMSHVMGAGDMN 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..106 CDD:285071
C2H2 Zn finger 369..389 CDD:275368
C2H2 Zn finger 397..418 CDD:275368
C2H2 Zn finger 442..460 CDD:275368
C2H2 Zn finger 730..750 CDD:275368
C2H2 Zn finger 758..777 CDD:275368
C2H2 Zn finger 1089..1110 CDD:275368 4/20 (20%)
C2H2 Zn finger 1124..1144 CDD:275368 5/19 (26%)
C2H2 Zn finger 1151..1172 CDD:275368 8/20 (40%)
C2H2 Zn finger 1180..1203 CDD:275368 7/23 (30%)
C2H2 Zn finger 1210..1230 CDD:275368 8/19 (42%)
C2H2 Zn finger 1238..1254 CDD:275368 4/15 (27%)
CG11695NP_572732.1 zf-AD 2..81 CDD:285071 2/9 (22%)
C2H2 Zn finger 268..289 CDD:275368 4/20 (20%)
C2H2 Zn finger 299..319 CDD:275368 5/19 (26%)
C2H2 Zn finger 327..348 CDD:275368 8/20 (40%)
C2H2 Zn finger 357..376 CDD:275368 6/18 (33%)
C2H2 Zn finger 389..409 CDD:275368 2/19 (11%)
C2H2 Zn finger 420..440 CDD:275368 1/19 (5%)
C2H2 Zn finger 448..468 CDD:275368 8/19 (42%)
C2H2 Zn finger 476..494 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439986
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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