DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and Zfp142

DIOPT Version :10

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_001418925.1 Gene:Zfp142 / 316524 RGDID:1309648 Length:1859 Species:Rattus norvegicus


Alignment Length:1454 Identity:261/1454 - (17%)
Similarity:414/1454 - (28%) Gaps:524/1454 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 LRCLLFCVSADNAPELPQ------------HICLECS-----KSLQVAYYFLQNALRAHEI-LCR 105
            ||| .||..|...|...|            |.|.||:     |.:.:.:..|....:.|:. ||.
  Rat   571 LRC-TFCPFATFNPVAYQDHVGKMHAHEKIHQCSECNFATAHKRVLIRHMLLHTGEKPHKCELCD 634

  Fly   106 KLCPKVSKRLNGTLAQEQEKP-ACAEPVQPLK--------------------------------- 136
            ..|..||......|.....|. .|.|.....|                                 
  Rat   635 FTCRDVSYLSKHMLTHSNTKDYMCTECGYVTKWKHYLSVHMRKHAGDLRYQCNQCSYRCHRADQL 699

  Fly   137 ---TMRHE-----CQVCGVVLYNRLELKQHI-RQHAEGL-------------------------- 166
               .:||:     |:||......:.||::|: .||..|.                          
  Rat   700 SSHKLRHQGKSLMCEVCAFACKRKYELQKHMASQHHPGTPAPLYPCRYCSYQSRHKQALLSHENC 764

  Fly   167 ------SYNCKLCSFTSLKQRTLFEHYVTMHN-MPLSQAEEYVKSKHLPAPKEEEVKAVCTLEDM 224
                  .::|.||.:.:....|||.|...:|. ||..|..::..     |.:|.|....|     
  Rat   765 KHTHLREFHCALCDYRTFSNTTLFFHKRKVHGYMPGDQVWQFCN-----ASQELEGARQC----- 819

  Fly   225 ELLIPTVLRPEDYVQPHPHIDNDQLRDIDHQLAVS--MDEPVPSVDSLTSTL------------- 274
             |..|:...|...:...|     :..|.:|::..|  :|:.:|..:...||.             
  Rat   820 -LAPPSDSGPSSQLSAQP-----EKEDHEHEIGASSIVDQALPETNEEASTKRQDGIEAPQEDDQ 878

  Fly   275 -------------------------------PPMDTPNVSIGTEYLVL-PDGSLQQVNGSGVVIE 307
                                           ||::....:...|:..| |.|.|:.....|:...
  Rat   879 VGSPSLGEVEEGGCTLHLEALRVELEPEAEPPPLEELTETAAVEFRPLEPSGPLRTDRPGGLAEP 943

  Fly   308 YIDDSKPNSSSNVNVSLQNLLSSHNDPMDIDVNELIVEEMMPQIRIKPKPAVIGTSIHKHKCKFC 372
            .:.|.....:...:.:......|......:...|.::|::..:   .|:..:|...        .
  Rat   944 QLPDFDSAGTPAFDSAGTPAFDSAGTSALVAEEEPLLEKLASE---PPRNPLISEE--------A 997

  Fly   373 PKTFSTVARLKSHQLTHSNLPKFFCDQCDFYSLRSADLIQHYKMVHHRVDENGKTGKEQAQGI-- 435
            |.||.  |.|.:..:....:|:            |..|::..:          :..||||:.:  
  Rat   998 PNTFK--ATLTAETVPLPQVPE------------SESLLKAMR----------RQDKEQAEALVL 1038

  Fly   436 -----------ESRVYSCDMCLFETSTVSQLRTHYK-------------------------ERHT 464
                       |.|.:.|..|.|.|.....|..|.|                         ..|.
  Rat  1039 EGRVQMVVIQGEGRAFRCPHCPFITRREKALTLHSKSGCQGRREPLLCPECGASFKQQRGLSTHM 1103

  Fly   465 VQPTEVQLRPSWTGEPTTTRGVAAKQQTPAKILNHTDIPL--------GIKYPPGVLETQ----- 516
            ::...|.||          :..|.....|.....|.::|.        ..|.||...:.:     
  Rat  1104 LKKCPVLLR----------KNKALALPKPVSPTLHPELPSSQASQDAESRKPPPSPSKVELSISK 1158

  Fly   517 ---APLP-QPVVHQPMPDPMQ-QTEPMATTSTTIT------ESGDINVVVDATPLFYAATSNSLL 570
               :.|| :|.|.:.:|.|.. .|.|...:..|.|      |.|.           :...|.:.|
  Rat  1159 DASSELPGEPGVEEHLPTPSDFPTSPPGNSLPTGTSEKFHFEQGK-----------FHCNSCTFL 1212

  Fly   571 VTNPAPVTTVEETTGTASNHAFGI---FPEISEGNLPVNEAVQQAPANSSSVSVFGDMQDFIDNT 632
            .:..:.:|: ..|.|....|:.|.   .|:.....||:|..........|:.|..||....:...
  Rat  1213 CSRLSSITS-HVTEGCRGAHSQGRKRGRPQTHAVVLPLNNGDSTLLNTGSTDSSPGDRDTAVVQK 1276

  Fly   633 DVAAICTIP----------------ADGMPVVDGDDIVIDNNNISLDFDAENLFEDFEEEEDDTV 681
            ....:.:.|                ..|.|:..||   :..........|.......::....|.
  Rat  1277 QKGTLYSCPTCPFSCQQERTLKTHQTQGCPLEPGD---LHCGLCPFTAPAPAALRLHQKRRHPTA 1338

  Fly   682 ADEEDEADNEDENDNNDAATDQNLLLTSDDDDVDDFDDEQSKHLQ----------KPY-CIYCNK 735
                           :.|:..:.||...|    ..|..:||:.||          ||: |.:|:.
  Rat  1339 ---------------SPASGPRPLLQCGD----CGFTCKQSRCLQQHRRLKHEGVKPHQCPFCDF 1384

  Fly   736 KFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIKHYKTVHKRMPTRDMVQAKGDKVSVART 800
            ..|.:|:.|.|...|.|:....|..|...:.....|..|...||.:.||.               
  Rat  1385 STTRRYRLEAHQSRHTGVGRIPCSSCPQTFGTNSKLRLHQLRVHDKTPTH--------------- 1434

  Fly   801 NIEKLYPGRIKNPMLMCAKCPFECESDSEMRKHLNAHHGINDGVSEHANEVFIIRKLPFECPRCI 865
                           .|..|.:......::.:|:|:.|   .|...            |.|.:|.
  Rat  1435 ---------------FCPLCDYSGYLRHDITRHVNSCH---QGTPS------------FSCSQCE 1469

  Fly   866 RSFAAKTTLSRHLQRSHLVDTIIEMQTPHCGEAITTTMATSSSTISEPVNSVTVDGQHNEMMQTD 930
            ..|:::|.|.:|..|.|      ...||..|..:..|                            
  Rat  1470 AQFSSETALKQHALRRH------PEPTPSSGCPVDVT---------------------------- 1500

  Fly   931 VGAEKMTEALGNGDGNEEGGTDDGTGVKAEPAVPEEELDPVTLDAATAVTTTAIAAAISAAAAAT 995
                                                                             
  Rat  1501 ----------------------------------------------------------------- 1500

  Fly   996 ATSLESPVATTASSSTTLFPTPTPFDFDYDIMRDEAQQSSPNIHDVSKALSDNASSSCPINESYK 1060
                |.|:  ..|....|.|:|..       :|...::..|.:.          ..:|  .||: 
  Rat  1501 ----EGPL--HCSHCGLLCPSPAS-------LRGHTRKQHPRLE----------CGAC--QESF- 1539

  Fly  1061 LLSTTALETSPAKGLRSNSRLHRSSIHICKLCNQTFDELGKLVKHEMELHSNTERS----RWGYQ 1121
                   .:.||  |..:.|.|..| |.|:||:....|...||||.:|.|..|..:    ..|..
  Rat  1540 -------PSRPA--LDEHRRQHHFS-HRCQLCSFAARERVGLVKHYLEQHEETSTAPSDGDAGQP 1594

  Fly  1122 HKCA-ICNTSYRTLTLLKFHMKRH-SNRKSQCKLCPKSFVTIAELERHTKAKHSKDKTLRCFM-- 1182
            ..|. .|:.:.|...:|..|:|.| ..|..:|..|..|.....::..|::. |:.:|..||.:  
  Rat  1595 SLCCPFCDFACRHQLVLDHHVKGHGGTRLYKCTDCAYSTKNRQKITWHSRI-HTGEKPYRCHLCS 1658

  Fly  1183 DGCRKTFAFKHHLIRHQKASHLSTRYICPVCNKEEKSNVHLKNHMSVHKGEITYKCPKCDRSYLR 1247
            ..|......|:|:..|::    ..:|:||.|..:.|....||.||:.|.|...|:||:|:....|
  Rat  1659 YACADPSRLKYHMRIHKE----ERKYLCPECGYKCKWVNQLKYHMTKHTGLKPYQCPECEYCTNR 1719

  Fly  1248 RGRLVTHALIIH-DLR-FTTEELG 1269
            ...|..|....| :.| |..|:.|
  Rat  1720 ADALRVHRETRHKEARAFMCEQCG 1743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..103 CDD:214871 15/61 (25%)
C2H2 Zn finger 369..389 CDD:275368 5/19 (26%)
C2H2 Zn finger 397..418 CDD:275368 2/20 (10%)
C2H2 Zn finger 442..460 CDD:275368 6/17 (35%)
C2H2 Zn finger 730..750 CDD:275368 6/19 (32%)
C2H2 Zn finger 758..777 CDD:275368 4/18 (22%)
C2H2 Zn finger 1089..1110 CDD:275368 9/20 (45%)
C2H2 Zn finger 1124..1144 CDD:275368 6/20 (30%)
C2H2 Zn finger 1151..1172 CDD:275368 4/20 (20%)
C2H2 Zn finger 1180..1203 CDD:275368 5/24 (21%)
C2H2 Zn finger 1210..1230 CDD:275368 8/19 (42%)
C2H2 Zn finger 1238..1254 CDD:275368 5/15 (33%)
Zfp142NP_001418925.1 COG5048 339..780 CDD:227381 39/209 (19%)
C2H2 Zn finger 364..384 CDD:275368
C2H2 Zn finger 392..412 CDD:275368
C2H2 Zn finger 420..437 CDD:275368
C2H2 Zn finger 454..474 CDD:275368
C2H2 Zn finger 520..539 CDD:275368
C2H2 Zn finger 544..565 CDD:275368
C2H2 Zn finger 573..594 CDD:275368 6/21 (29%)
zf-H2C2_5 600..624 CDD:404746 6/23 (26%)
C2H2 Zn finger 602..622 CDD:275368 4/19 (21%)
C2H2 Zn finger 630..650 CDD:275368 6/19 (32%)
C2H2 Zn finger 658..678 CDD:275368 3/19 (16%)
C2H2 Zn finger 686..706 CDD:275368 0/19 (0%)
C2H2 Zn finger 713..730 CDD:275368 5/16 (31%)
C2H2 Zn finger 1284..1313 CDD:275368 5/31 (16%)
C2H2 Zn finger 1350..1371 CDD:275368 6/24 (25%)
C2H2 Zn finger 1379..1399 CDD:275368 6/19 (32%)
C2H2 Zn finger 1407..1428 CDD:275368 4/20 (20%)
C2H2 Zn finger 1465..1486 CDD:275368 7/20 (35%)
C2H2 Zn finger 1506..1524 CDD:275368 5/24 (21%)
C2H2 Zn finger 1532..1552 CDD:275368 7/31 (23%)
C2H2 Zn finger 1598..1618 CDD:275368 5/19 (26%)
C2H2 Zn finger 1626..1646 CDD:275368 4/20 (20%)
C2H2 Zn finger 1654..1674 CDD:275368 4/19 (21%)
C2H2 Zn finger 1682..1702 CDD:275368 8/19 (42%)
zf-H2C2_2 1695..1719 CDD:463886 10/23 (43%)
C2H2 Zn finger 1710..1731 CDD:275368 6/20 (30%)
C2H2 Zn finger 1739..1759 CDD:275368 2/5 (40%)
C2H2 Zn finger 1767..1787 CDD:275368
C2H2 Zn finger 1795..1815 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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