DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and CG3032

DIOPT Version :10

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_572376.1 Gene:CG3032 / 31648 FlyBaseID:FBgn0029928 Length:431 Species:Drosophila melanogaster


Alignment Length:671 Identity:117/671 - (17%)
Similarity:172/671 - (25%) Gaps:294/671 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   613 PANSSSVSVFGDMQDFIDNTDVAAICTIPADGMPV---VDGDDIVIDNN-----NISLDFDAENL 669
            |.|.:..||          .::...|.:..:..|:   :..|:|.|...     ||:|..|.||.
  Fly     2 PLNLTRESV----------RELCCTCLLQLEKEPLKTELQSDEIPISQELQQLLNINLSQDVENQ 56

  Fly   670 ---------------------FEDFEEEEDDTVAD-----EEDEADNEDENDNNDAATDQNLL-- 706
                                 ||.|..:.|:....     ::|..:...|...:....||..|  
  Fly    57 DADQQWLPNELCLECRSAVQNFEKFRRKADECRKQLLEMLKKDPREPTFEVVYDGREEDQESLHG 121

  Fly   707 -----LTSDDDDVDDFDDEQSKHLQKPY--------CIYCNKKFTSQYKFENHM-FVHRG-LAPY 756
                 ...|.|.:|:...:..|..:|.:        |..|.:.|..|.....|: .||.| ..|:
  Fly   122 LEPPEPAPDPDPIDEPAIKSDKSPRKSFRGSRNTLKCSVCRRSFAHQITLAAHIRKVHEGSKRPF 186

  Fly   757 RCELCTNLYNMKRLLIKHYKTVHKRMPTRDMVQAKGDKVSVARTNIEKLYPGRIKNPMLMCAKCP 821
            :|:.|...|:....|..|.:.||.....|......|         .|::|..||           
  Fly   187 QCDQCEKAYSFMGGLYTHIREVHAPKERRHPCDQPG---------CERIYTSRI----------- 231

  Fly   822 FECESDSEMRKHLNAHHGINDGVSEHANEVFIIRKLPFECPRCIRSFAAKTTLSRHLQRSHLVDT 886
                   .|:||....|...|   ..|.:.||       |.:|..||.....|..||:..|..: 
  Fly   232 -------AMQKHKRLKHSPRD---RDALKKFI-------CEQCGASFNQSANLKYHLKTKHPTE- 278

  Fly   887 IIEMQTPHCGEAITTTMATSSSTISEPVNSVTVDGQHNEMMQTDVGAEKMTEALGNGDGNEEGGT 951
                                                                       :|....
  Fly   279 -----------------------------------------------------------DEVAAR 284

  Fly   952 DDGTGVKAEPAVPEEELDPVTLDAATAVTTTAIAAAISAAAAATATSLESPVATTASSSTTLFPT 1016
            :.|.|.:                                                          
  Fly   285 EGGAGER---------------------------------------------------------- 291

  Fly  1017 PTPFDFDYDIMRDEAQQSSPNIHDVSKALSDNASSSCPINESYKLLSTTALETSPAKGLRSNSRL 1081
                                                                             
  Fly   292 ----------------------------------------------------------------- 291

  Fly  1082 HRSSIHICKLCNQTFDELGKLVKHEMELHSNTERSRWGYQHKCAICNTSYRTLTLLKFHMKRHSN 1146
                 |.|.:|.:.|.....|..|.::.|...|.    ..|:|.:|........:|..||..|||
  Fly   292 -----HFCDICQKEFHSRYTLKYHTLQQHEVQEE----LPHECQVCGRRMAKKFMLLQHMLMHSN 347

  Fly  1147 RKSQCKLCPKSFVTIAELERHTKAKHSKDKTLRCFMDGCRKTFAFKHHLIRHQKASHLSTR-YIC 1210
            .|..|:.|.:.|....|||.|.:|.|.|.|...|  ..|.::||.:..| ||.:..|...: |||
  Fly   348 DKLPCEHCGRRFARRFELEAHVRAVHLKLKPFPC--HHCPESFASRKTL-RHHEYIHTGEKPYIC 409

  Fly  1211 PVCNKEEKSNVHLKNHMSVHK 1231
            ..|.:..:....||||..||:
  Fly   410 DTCGQAFRQQTCLKNHRKVHE 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..103 CDD:214871
C2H2 Zn finger 369..389 CDD:275368
C2H2 Zn finger 397..418 CDD:275368
C2H2 Zn finger 442..460 CDD:275368
C2H2 Zn finger 730..750 CDD:275368 5/20 (25%)
C2H2 Zn finger 758..777 CDD:275368 5/18 (28%)
C2H2 Zn finger 1089..1110 CDD:275368 5/20 (25%)
C2H2 Zn finger 1124..1144 CDD:275368 5/19 (26%)
C2H2 Zn finger 1151..1172 CDD:275368 8/20 (40%)
C2H2 Zn finger 1180..1203 CDD:275368 7/22 (32%)
C2H2 Zn finger 1210..1230 CDD:275368 6/19 (32%)
C2H2 Zn finger 1238..1254 CDD:275368
CG3032NP_572376.1 zf-AD 13..95 CDD:462262 15/81 (19%)
C2H2 Zn finger 158..179 CDD:275368 5/20 (25%)
C2H2 Zn finger 188..209 CDD:275368 5/20 (25%)
SFP1 <213..275 CDD:227516 21/98 (21%)
C2H2 Zn finger 218..239 CDD:275368 8/47 (17%)
C2H2 Zn finger 254..275 CDD:275368 7/20 (35%)
C2H2 Zn finger 294..315 CDD:275368 5/20 (25%)
C2H2 Zn finger 325..345 CDD:275368 5/19 (26%)
C2H2 Zn finger 352..373 CDD:275368 8/20 (40%)
C2H2 Zn finger 381..401 CDD:275368 7/22 (32%)
C2H2 Zn finger 409..429 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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