DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and Zfp407

DIOPT Version :9

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:XP_008770443.2 Gene:Zfp407 / 307213 RGDID:1310645 Length:2255 Species:Rattus norvegicus


Alignment Length:1474 Identity:251/1474 - (17%)
Similarity:448/1474 - (30%) Gaps:571/1474 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LSCRCCLKTNVEYVKLDSVSVARSLDPADATEKIPLLRCLLFCVSAD---NAPELPQHICLECSK 84
            |||:||     .::.|...|:...:.......        .||.|.:   :..::.:|...|...
  Rat   581 LSCQCC-----PFISLSETSLRVHMKEKHGMG--------FFCTSCNLFLSERDVEEHRATEAHN 632

  Fly    85 SLQVAYYFLQNALRAHEILCRKLCPKVSKRL------------NGTLAQEQEKPACAEPVQPLKT 137
            ||.|.                   ||.:..|            :..:|..:|....|...:|.::
  Rat   633 SLVVQ-------------------PKTASSLSRDSVLPLSTLESDNMADSREDSGKASQEEPAES 678

  Fly   138 -------MRH------ECQVCGVVLYNRLELKQHIR-QHAEGLSYNCKLCSFTSLKQRTLFEHYV 188
                   .||      :|:.|.....:...|.:||: :|.:...:.||.|:..||.:..:     
  Rat   679 RASHGTEARHSSKPQFQCKKCFYKTRSSTVLTRHIKLRHGQDYHFLCKACNLYSLSKEGM----- 738

  Fly   189 TMHNMPLSQAEEYVK-SKHLPAPK--------EEEVKAVC---TLEDMELLIPTVLRPEDYV--- 238
                      |:::| ||||...|        ||.::.||   ..:..|..:....|||.::   
  Rat   739 ----------EKHIKRSKHLENAKKNNIGLSFEECIERVCIGANDKKEESNVSGSGRPEGHIGVR 793

  Fly   239 -QPHPHIDNDQL--RDIDHQLAVSMDEPVPSVDSLTSTLPPMDTPNVSIG--------------- 285
             |.|.|.:...|  :::.....::.::.:    .|.|| |....|..||.               
  Rat   794 LQEHSHCEQSMLTPKELPQSGVITKEDEL----GLAST-PKRGRPKGSISRTCSHCGLLASSITN 853

  Fly   286 -------------------TEYLVLPDGSLQ--------------QVNG---SGVVIE------- 307
                               .:|..:..|.::              :.||   |.:::.       
  Rat   854 LTVHIRRKHSHQYSYLCKVCKYYTVTKGDMERHCATKKHKGRVEIEANGKHSSDIIVGPEGGNLE 918

  Fly   308 ---------YIDDSKPNSSSNVNVS-LQNLLSSHNDPMDIDVNELIVE---EMMPQIRIKPKPAV 359
                     .:.|.:.|.|:..:.| |...:..:.|..|.|....:..   |:..|:..|.....
  Rat   919 ACKKSTLALTVSDEQANKSAKSDASTLDKPVVGNGDTGDADAGSALQSVDGEVSSQLADKKGQIA 983

  Fly   360 IGT-SIHKH---------------KCKFCPKTFSTVARLKSH-QLTHSNLPKFFCDQCDFYSLRS 407
            :.| .:.:|               ||..|..:..:.|.|:.| :..|:...:|:|..||:|::..
  Rat   984 LETEDLQQHDDACSQRDVAGSSDNKCLHCEFSAHSAASLELHVKRKHTKEFEFYCMACDYYAVTR 1048

  Fly   408 ADLIQHYKMVHHRVDENGKTGKEQAQGIESRVYSCDMCLFETSTVSQLRTHYKERHTVQPTEVQL 472
            .::.:|.....|::       |.|:....|.|.:      .:|.:|:..|..:|.|:....|.|:
  Rat  1049 REMTRHAATEKHKM-------KRQSYLSSSNVEA------GSSEISKSITIPEEEHSQNSEEFQI 1100

  Fly   473 RPSWTGEPTTTRGVAAKQQTPAKILNHTDIPLGIKYPPGVLETQAPLPQPVVHQPMPDPMQQTEP 537
            .|..:.                                |.|:::.|                   
  Rat  1101 SPHQSS--------------------------------GTLQSRHP------------------- 1114

  Fly   538 MATTSTTITESGDINVVVDATPLFYAATSNSLLVTNPAPVTTV-EETTGTASNHAF--------- 592
                       .|.:::.|.|.|     ..|.::..|..|..| |:.:....:|:|         
  Rat  1115 -----------ADCSILYDNTNL-----DMSKVLCAPDSVAVVAEQESNFNEDHSFCETLHQPLA 1163

  Fly   593 ---GIFP-EISEGNLPVNEA----VQQAPANSSSV---------SVFGDMQD----------FID 630
               .|.| ||...|.|.|.:    :|.....||:|         ::..|:.|          .:|
  Rat  1164 KDRSIKPREIVSLNTPSNRSSPGCLQSGNLASSAVDSETAKRNHNLLDDVGDTSAHCEDEGGSLD 1228

  Fly   631 NTDVAAICTIPADG-----------MPVVDGDDIVIDNNNISLD------FDAENLFEDFEE--- 675
            .::...:...|..|           .|||    :.|....:.||      ...|...||.::   
  Rat  1229 GSEEKVLDKSPCPGDLDGGHSAESISPVV----VKIPREQLDLDGGGQSKVGCEQTSEDLKDVQA 1289

  Fly   676 -------------EEDDTVADEEDEADNEDENDNNDAATDQNLLLTSDDDDVDDFDDEQSKHLQK 727
                         :.:..|..|||...:....:||||   ...:::.||               |
  Rat  1290 NSNLESKEILMNSQHEPEVILEEDAPASIGTAENNDA---YETIISIDD---------------K 1336

  Fly   728 PYCIYCNKKFTS---QYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIKHYKTVHKRMPTRDMVQ 789
            ...:|...:|.|   :.|.|:...|.:              ..:.|::...|.  ..:|.:|..|
  Rat  1337 GQTMYSFGRFDSSIIRIKTEDGELVEQ--------------PEEGLMVTGGKV--SELPLKDCAQ 1385

  Fly   790 AKGDKVSVARTNIEKLYPGRIKNPMLMCAKCPFECESDSEMRKHLNAHHGINDGVSEHANEVFII 854
                  .:.:..:|....|  ::..:.|..|.|..:..|.:..|:...|...:   :|       
  Rat  1386 ------GLKKKKVEGSSFG--ESTRIRCDDCGFLADGLSGLNVHIAMKHPTKE---KH------- 1432

  Fly   855 RKLPFECPRCIRSFAAKTTLSRHL-QRSHLVDTIIEM-QTPHCGEAITTTMATSSSTISEPVNS- 916
                |.|..|.:||..::.|.:|| ...|:.:....: :.|..|........|      ||.:| 
  Rat  1433 ----FHCLLCGKSFYTESNLHQHLASAGHMRNEQASVEELPEGGATFKCVKCT------EPFDSE 1487

  Fly   917 ----VTVDGQHNEMMQTDVGAEKMTEALGNGDGNEEGGTDDGTGVKAEPAVPEEELDPVTLDAAT 977
                :.:.|||.|:::                                      |::...::   
  Rat  1488 QNLFLHIKGQHEELLR--------------------------------------EVNKYIVE--- 1511

  Fly   978 AVTTTAIAAAISAAAAATATSLESPVATTASSSTTLFPTPTPFDFDYDIMRDEAQQSSPNIHDVS 1042
                                                         |.:.:..|.:::..|:    
  Rat  1512 ---------------------------------------------DTEQINREREENQGNV---- 1527

  Fly  1043 KALSDNASSSCPINESYKLLSTTALETSPAKGLRSNSRLHRSSIHI-CKLCNQTFDELGKLVKHE 1106
               .......|..:.|...|              ::.|.|..|... ||:|:....:||      
  Rat  1528 ---CKYCGKMCRSSNSMAFL--------------AHIRTHTGSKPFKCKICHFATAQLG------ 1569

  Fly  1107 MELHSNTERSRWGYQHKCAICNTSYRTLTLLKFHMKRH----------SNRKSQCKLCPKSFVTI 1161
             :..::.:|.....::||.:|..::    ::|.|:..|          ..||..|.||.:||...
  Rat  1570 -DARNHVKRHLGMREYKCHVCGVAF----VMKKHLNTHLLGKHGVGTPKERKFTCHLCDRSFTEK 1629

  Fly  1162 AELERHTKAKHSKDKTLRCFMDGCRKTF----AFKHH------------------------LIRH 1198
            ..|..|.|. |:.:|..:|....|..:|    |.|.|                        |.:|
  Rat  1630 WALNNHVKL-HTGEKPFKCTWPTCHYSFLTASAMKDHYRTHTGEKSFLCDLCGFAGGTRHALTKH 1693

  Fly  1199 QKASHLSTRYICPVCNKEEKSNVHLKNHMSVHKGEITYKCPKCD 1242
            ::.......:.|..||....:..||..|..||.||..|:||.||
  Rat  1694 RRQHTGEKPFKCDECNFASTTQSHLTRHKRVHTGEKPYRCPWCD 1737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..106 CDD:285071 13/83 (16%)
C2H2 Zn finger 369..389 CDD:275368 5/20 (25%)
C2H2 Zn finger 397..418 CDD:275368 5/20 (25%)
C2H2 Zn finger 442..460 CDD:275368 3/17 (18%)
C2H2 Zn finger 730..750 CDD:275368 5/22 (23%)
C2H2 Zn finger 758..777 CDD:275368 1/18 (6%)
C2H2 Zn finger 1089..1110 CDD:275368 5/20 (25%)
C2H2 Zn finger 1124..1144 CDD:275368 4/19 (21%)
C2H2 Zn finger 1151..1172 CDD:275368 8/20 (40%)
C2H2 Zn finger 1180..1203 CDD:275368 8/50 (16%)
C2H2 Zn finger 1210..1230 CDD:275368 6/19 (32%)
C2H2 Zn finger 1238..1254 CDD:275368 4/5 (80%)
Zfp407XP_008770443.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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