DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30020 and Zfp407

DIOPT Version :9

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_001028513.2 Gene:Zfp407 / 240476 MGIID:2685179 Length:2246 Species:Mus musculus


Alignment Length:1623 Identity:283/1623 - (17%)
Similarity:508/1623 - (31%) Gaps:544/1623 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALNKRKSPYSDPISGAEVDYKLSCRCCLKTNVEYVKLDSVSVARSLDPADATEKIPLLRCLLFC 65
            :.:|||.:..:..:      |....|..:|||.:.| |:.|.:::.:..              .|
Mouse   439 LGINKRGTNETQRM------YMKHFRTQMKTNAQPV-LEQVEMSKDVQS--------------LC 482

  Fly    66 VSADNAPELPQHICLECSKSLQVAYYFLQNALRAHEILCRKLCPKVSKRLNGTLAQEQEKPACAE 130
            |:..:.||:.|.         :.|:                 |...|.|| |:|           
Mouse   483 VTTSDNPEVMQD---------KTAF-----------------CLSGSTRL-GSL----------- 509

  Fly   131 PVQPLK---TMRHECQVCGVVLYNRLELKQHIRQ-HAEGLSYNCKLCSFTSLKQRTLFEHYVT-- 189
            ||:|..   :::..|..||.:..|:.:.:.|::| |...:.::|:.|.|:|..:|.|.||..:  
Mouse   510 PVKPADHQLSVQCTCTECGQIAANKTDFEVHVKQCHGREMQFHCQTCDFSSPSRRDLEEHVHSNQ 574

  Fly   190 -MHNMPLSQAE-------------EYVKSKH------------LPAPKEEEVKAVCTLEDMELLI 228
             .|..|:...:             :::|.||            |.....||.:|..:...:    
Mouse   575 HQHMTPVLSCQCCSFISLNETGLRDHMKEKHGMGFFCTSCNLFLSEKDVEEHRATESHNSL---- 635

  Fly   229 PTVLRPE-------DYVQPHPHIDNDQLRDIDHQLAVSMDE-PVPS-----VDSLTSTLPPMD-- 278
              |::|:       |.|.|...::::...|.......:..| |..|     .::..|:.|...  
Mouse   636 --VVQPKTASSLSGDSVLPFSTVESENPADSREDSGKAAQEGPAESRASHGTEARHSSKPQFQCK 698

  Fly   279 -----TPNVSIGTEYLVLPDG----------SLQQVNGSGVV-----IEYIDDSKPNSSSNVNVS 323
                 |.:.::.|.::.|..|          :|..::..|:.     .::::::|.|   |:.:|
Mouse   699 KCFYKTRSSTVLTRHIKLRHGQDYHFLCKACNLYSLSKEGMEKHIKRSKHLENAKKN---NIGLS 760

  Fly   324 LQNLLS----SHND---------------------------------PMDIDVNELIVEE----- 346
            .:..:.    ..||                                 |.::..:.:|.:|     
Mouse   761 FEECIERVCIGANDKKEESSVSGSGRPEGHVGVQSQEHSQREQSMLTPKELPQSGVITKEDELGL 825

  Fly   347 -MMPQIRIKPKPAVIGTSIHKHKCKFCPKTFSTVARLKSH-QLTHSNLPKFFCDQCDFYSLRSAD 409
             ..|: |.:||.::..|      |..|....|::..|..| :..||:...:.|..|.:|::...|
Mouse   826 ATTPK-RGRPKGSISRT------CSHCGLLASSITNLTVHIRRKHSHQYSYLCKVCKYYTVTKGD 883

  Fly   410 LIQHYKMVHHR----VDENGKTGKEQAQGIE---------------------------------- 436
            :.:|.....|:    ::.|||...:...|.|                                  
Mouse   884 MERHCATKKHKGRVEIEANGKQSSDIVVGPEGGNLEACKDSTSLAVTVSDAQASKPAKSDTRTLE 948

  Fly   437 ---------------------------------------------------------SRVYSCDM 444
                                                                     |....|..
Mouse   949 TPGVGIGNAGDAEAGSVFPSGDGELSSQLSDKKGQLSLETEDLLQLDDACSQREVAGSSDNKCLQ 1013

  Fly   445 CLFETSTVSQLRTHYKERHTVQPTEVQL-----------RPSWTGEPTTTRGVAAKQQTPAKILN 498
            |.|...:.:.|..|.|.:||   .|.|.           |...|....|.:....:|    ..|:
Mouse  1014 CEFSAHSAASLELHVKRKHT---KEFQFYCMACDYYAVTRREMTRHAATEKHRMKRQ----SYLS 1071

  Fly   499 HTDIPLGIKYPPGVLETQAPLPQPVVHQPMPDPMQQTEPMATTSTTITESGDINVVVDATPLFYA 563
            .:.:..|    ...:.....:|:. .|....:..|.....::.:.......|.:::.|.|.|   
Mouse  1072 ASSVEAG----SSEISKNITIPEE-EHSHNSEEFQIHPHQSSGTLQCRNPADCSILDDNTNL--- 1128

  Fly   564 ATSNSLLVTNPAPVTTV-EETTGTASNHAF------------GIFP-EISEGNLPVNEAV----- 609
              ..|.::..|..||.| |:.:..:..|:|            .:.| ||...|.|.|.::     
Mouse  1129 --GMSKVLCAPDSVTVVTEQESNFSEGHSFCETLQQPLVKDKSMKPREIVSPNTPSNLSLPGCLQ 1191

  Fly   610 -----------QQAPANSSSVSVFGDMQ-------DFIDNTDVAAICTIPADGMPVVDG------ 650
                       :.|..|...:...||..       ..:|:::...:...|..|.|  ||      
Mouse  1192 SENLASSAVDCETAKKNRDVLDAVGDRSTPCEDEGGSVDDSEEKILDKSPCPGDP--DGGHSAES 1254

  Fly   651 -DDIVIDNNNISLDFD--------AENLFEDFEEEEDDTVADEEDEADNEDEND----NNDAATD 702
             ..:|:......||.|        .|...||.::.:.:.:.:.::...|..|..    ..||.|.
Mouse  1255 TSSVVMKIPREQLDLDGGGQNKVGCEQTSEDLKDVQANPILENKEILINSQEEAEVILEEDAPTS 1319

  Fly   703 QNLLLTSDDDDVDD----FDDEQSKHLQKPYCIYCNKKFTS---QYKFENHMFVHR---GLAPYR 757
            ..   |:|.:||.:    .||       |...:|...:|.|   :.|.|:...|.:   ||....
Mouse  1320 NG---TADSNDVYETIISIDD-------KGQTMYSFGRFDSSIIRIKTEDGELVEQPEEGLTATG 1374

  Fly   758 CELCTNLYNMKRLLIKHYKTVHKRMPTRDMVQAKGDKVSVARTNIEKLYPGRI-KNPMLMCAKCP 821
            ..:                   ..:|.:|..|....|         |:..|.. ::..:.|..|.
Mouse  1375 GRV-------------------SELPLKDCAQGLKKK---------KVEGGSFGESTRIRCDDCG 1411

  Fly   822 FECESDSEMRKHLNAHHGINDGVSEHANEVFIIRKLPFECPRCIRSFAAKTTLSRHL-QRSHLVD 885
            |..:..|.:..|:...|...:   :|           |.|..|.:||..::.|.:|| ...|:.:
Mouse  1412 FLADGLSGLNVHIAMKHPTKE---KH-----------FHCLLCGKSFYTESNLHQHLASAGHMRN 1462

  Fly   886 TIIEM-QTPHCGEAITTTMATSSSTISEPVNS-----VTVDGQHNEMM-QTDVGAEKMTEALGNG 943
            ....: :.|..|........|      ||.:|     :.:.|||.|:: :.:....:.||.:...
Mouse  1463 EQASVEELPEGGATFKCVKCT------EPFDSEQNLFLHIKGQHEELLREVNKYIVEDTEQINRE 1521

  Fly   944 DGNEEGGTDDGTGVKAEPAVPEEELDPVTLDAATAVTTTAIAAAISAAAAATATSLESPVATTAS 1008
            ....:|......|                                ....::.:.:..:.:.|...
Mouse  1522 REENQGNVCKYCG--------------------------------KMCRSSNSMAFLAHIRTHTG 1554

  Fly  1009 SSTTLFPTPTPFDFDYDIMRDEAQQSSPNIHDVSKALS--DNASSSCPINESYKLLSTTALETSP 1071
            |.          .|...|......|.....:.|.:.|.  :.....|.:....|....|.|....
Mouse  1555 SK----------PFKCKICHFATAQLGDARNHVKRHLGMREYKCHVCGVAFVMKKHLNTHLLGKH 1609

  Fly  1072 AKGLRSNSRLHRSSIHICKLCNQTFDELGKLVKHEMELHSNTERSRWGYQHKCA--ICNTSYRTL 1134
            ..|.....:.      .|.||:::|.|...|..| |:||:..:      ..||.  .|:.|:.|.
Mouse  1610 GVGTPKERKF------TCHLCDRSFTEKWALNNH-MKLHTGEK------PFKCTWPTCHYSFLTA 1661

  Fly  1135 TLLKFHMKRHSNRKS-QCKLCPKSFVTIAELERHTKAKHSKDKTLRCFMDGCRKTFAFKHHLIRH 1198
            :.:|.|.:.|:..|| .|.||..:..|...|.:| :.:|:.:|..:|  |.|......:.||.||
Mouse  1662 SAMKDHYRTHTGEKSFLCDLCGFAGGTRHALTKH-RRQHTGEKPFKC--DECNFASTTQSHLTRH 1723

  Fly  1199 QKASHLSTRYICPVCNKEEKSNVHLKNHM---SVHKGEITYKCPKCD---------RSYLRRGR- 1250
            ::.......|.||.|:.......:::.|:   ..|:|...|.|||||         |::|:... 
Mouse  1724 KRVHTGEKPYRCPWCDYRSNCAENIRKHILHTGKHEGVKMYNCPKCDYGTNVPVEFRNHLKEQHP 1788

  Fly  1251 -------LVTHALIIH-----------------DLRFTTEELGNLSSLATNQARPNDLKVATP 1289
                   ...||.|:.                 |..||...|...|.:.....|.:..:.|:|
Mouse  1789 DIENPDLAYLHAGIVSKSYECRLKGQGATFVETDSPFTAATLAEESPVKERSLRSSKRQAASP 1851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..106 CDD:285071 13/80 (16%)
C2H2 Zn finger 369..389 CDD:275368 5/20 (25%)
C2H2 Zn finger 397..418 CDD:275368 5/20 (25%)
C2H2 Zn finger 442..460 CDD:275368 5/17 (29%)
C2H2 Zn finger 730..750 CDD:275368 5/22 (23%)
C2H2 Zn finger 758..777 CDD:275368 0/18 (0%)
C2H2 Zn finger 1089..1110 CDD:275368 8/20 (40%)
C2H2 Zn finger 1124..1144 CDD:275368 6/21 (29%)
C2H2 Zn finger 1151..1172 CDD:275368 6/20 (30%)
C2H2 Zn finger 1180..1203 CDD:275368 7/22 (32%)
C2H2 Zn finger 1210..1230 CDD:275368 4/22 (18%)
C2H2 Zn finger 1238..1254 CDD:275368 7/32 (22%)
Zfp407NP_001028513.2 C2H2 Zn finger 180..200 CDD:275368
C2H2 Zn finger 209..230 CDD:275368
C2H2 Zn finger 524..552 CDD:275371 7/27 (26%)
C2H2 Zn finger 553..575 CDD:275371 8/21 (38%)
C2H2 Zn finger 1407..1436 CDD:275371 7/42 (17%)
C2H2 Zn finger 1437..1459 CDD:275371 7/21 (33%)
C2H2 Zn finger 1479..1500 CDD:275371 5/26 (19%)
C2H2 Zn finger 1530..1552 CDD:275368 1/53 (2%)
zf-H2C2_2 1548..1569 CDD:290200 4/30 (13%)
C2H2 Zn finger 1560..1580 CDD:275368 3/19 (16%)
C2H2 Zn finger 1588..1608 CDD:275368 4/19 (21%)
COG5048 <1618..1737 CDD:227381 37/134 (28%)
C2H2 Zn finger 1621..1641 CDD:275368 8/20 (40%)
zf-H2C2_2 1633..1660 CDD:290200 9/33 (27%)
C2H2 Zn finger 1649..1671 CDD:275368 6/21 (29%)
C2H2 Zn finger 1679..1699 CDD:275368 6/20 (30%)
zf-H2C2_2 1691..1716 CDD:290200 7/27 (26%)
COG5048 1703..>1758 CDD:227381 13/56 (23%)
C2H2 Zn finger 1707..1727 CDD:275368 7/21 (33%)
zf-H2C2_2 1719..1744 CDD:290200 8/24 (33%)
C2H2 Zn finger 1735..1752 CDD:275368 3/16 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.