Sequence 1: | NP_610627.2 | Gene: | CG30020 / 36156 | FlyBaseID: | FBgn0050020 | Length: | 1309 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008758156.1 | Gene: | Znf48 / 103690203 | RGDID: | 9115869 | Length: | 590 | Species: | Rattus norvegicus |
Alignment Length: | 609 | Identity: | 113/609 - (18%) |
---|---|---|---|
Similarity: | 175/609 - (28%) | Gaps: | 230/609 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 730 CIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIKHYKTVHKR-------MPTRDM 787
Fly 788 VQAKGDKVSVARTNIEKLYPGRIKNPMLMCAKC---------------------PFECE------ 825
Fly 826 -SDSEMRKHLNAHHGINDGVSEHANEVFIIRKLPFECPRCIRSFAAKTTLSRHLQRSHLVDTIIE 889
Fly 890 MQTPHCGEAITTTMATSSSTISEPVNSVTVDGQHNEMMQTDVGAEKMTEALGNGDGNEEGGTDDG 954
Fly 955 TGVKAEPAVPEEELDPVTLDAATAVTTTAIAAAISAAAAATATSLESPVATTASSSTTLFPTPTP 1019
Fly 1020 FDFDYDIMRDEAQQSSPNIHDVSKALSDNASSSCPINESYKLLSTTALETSPAKGLRSNSRL--- 1081
Fly 1082 HRSSIH------ICKLCNQTFDELGKLVKHEMELHSNTERSRWGYQHKCAICNTSYRTLTLLKFH 1140
Fly 1141 MKRHSNRKSQCKLCPKSFVTIAELERHTKAKHSKDKTLRCFMDGCRKTFAFKHHLIRHQKASHLS 1205
Fly 1206 TRYICPVCNKEEKSNVHLKNHMSVHKGEITYKCPKCDRSYLRRGRLVTHALIIHDLRFTTEELGN 1270
Fly 1271 LS--SLATNQARPNDLKVATPVGL 1292 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG30020 | NP_610627.2 | zf-AD | 25..106 | CDD:285071 | |
C2H2 Zn finger | 369..389 | CDD:275368 | |||
C2H2 Zn finger | 397..418 | CDD:275368 | |||
C2H2 Zn finger | 442..460 | CDD:275368 | |||
C2H2 Zn finger | 730..750 | CDD:275368 | 5/19 (26%) | ||
C2H2 Zn finger | 758..777 | CDD:275368 | 5/18 (28%) | ||
C2H2 Zn finger | 1089..1110 | CDD:275368 | 6/20 (30%) | ||
C2H2 Zn finger | 1124..1144 | CDD:275368 | 4/19 (21%) | ||
C2H2 Zn finger | 1151..1172 | CDD:275368 | 3/20 (15%) | ||
C2H2 Zn finger | 1180..1203 | CDD:275368 | 0/22 (0%) | ||
C2H2 Zn finger | 1210..1230 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 1238..1254 | CDD:275368 | 2/15 (13%) | ||
Znf48 | XP_008758156.1 | zf-C2H2 | 84..105 | CDD:278523 | |
COG5048 | 85..471 | CDD:227381 | 79/421 (19%) | ||
C2H2 Zn finger | 85..105 | CDD:275368 | |||
zf-H2C2_2 | 97..120 | CDD:290200 | |||
C2H2 Zn finger | 113..133 | CDD:275368 | |||
C2H2 Zn finger | 165..185 | CDD:275368 | 5/19 (26%) | ||
zf-C2H2 | 165..185 | CDD:278523 | 5/19 (26%) | ||
zf-H2C2_2 | 177..200 | CDD:290200 | 7/22 (32%) | ||
C2H2 Zn finger | 193..213 | CDD:275368 | 6/20 (30%) | ||
C2H2 Zn finger | 248..268 | CDD:275368 | 2/19 (11%) | ||
C2H2 Zn finger | 276..296 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 288..312 | CDD:290200 | 9/39 (23%) | ||
C2H2 Zn finger | 304..324 | CDD:275368 | 8/20 (40%) | ||
zf-H2C2_2 | 319..340 | CDD:290200 | 7/27 (26%) | ||
C2H2 Zn finger | 332..352 | CDD:275368 | 2/26 (8%) | ||
zf-C2H2 | 423..445 | CDD:278523 | 9/38 (24%) | ||
C2H2 Zn finger | 425..445 | CDD:275368 | 9/36 (25%) | ||
zf-H2C2_2 | 437..461 | CDD:290200 | 6/25 (24%) | ||
C2H2 Zn finger | 453..537 | CDD:275368 | 26/140 (19%) | ||
COG5048 | 495..>563 | CDD:227381 | 19/117 (16%) | ||
zf-C2H2 | 515..537 | CDD:278523 | 6/21 (29%) | ||
zf-H2C2_2 | 529..552 | CDD:290200 | 9/22 (41%) | ||
C2H2 Zn finger | 545..565 | CDD:275368 | 3/31 (10%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166335954 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |