DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30020 and E430018J23Rik

DIOPT Version :9

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_932128.2 Gene:E430018J23Rik / 101604 MGIID:2141981 Length:461 Species:Mus musculus


Alignment Length:259 Identity:61/259 - (23%)
Similarity:90/259 - (34%) Gaps:63/259 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1049 ASSSCPINESYKLLSTTALETSPAKGLRSNSRLHRSSIHICKLCNQTFDELGKLVKH-------- 1105
            ||.||    :.:||...:.:..|...:. |..|.....|.|.:|.::|....|||:|        
Mouse   135 ASPSC----NLELLFKNSQQGHPTVAVH-NPILKADQRHGCHVCGKSFAHQSKLVEHLYTHTGEK 194

  Fly  1106 ---------------EMELHSNTERSRWGYQHKCAICNTSYRTLTLLKFHMKRHSNRKS-QCKLC 1154
                           .:.:|....|..  ..|:|..|..|:...:.|..||..|:..|. .|..|
Mouse   195 PFQCPDCDKYFGRASSLSMHRAIHRGE--RPHQCPDCGKSFTQRSTLVAHMYTHTGEKPFHCPDC 257

  Fly  1155 PKSFVTIAELERHTKAKHSKDKTLRCFMDGCRKTFAFKHHLI----------------------- 1196
            .|||...:.|..| :|.|..::. .|..| |.:.|..:..||                       
Mouse   258 NKSFSRPSSLSSH-RAIHRGERP-HCCSD-CGRAFTHRSGLIAHLRVHTGEKPYCCADCGRCFSQ 319

  Fly  1197 -----RHQKASHLS-TRYICPVCNKEEKSNVHLKNHMSVHKGEITYKCPKCDRSYLRRGRLVTH 1254
                 .||:..|.. |.:.|..|.:......:|:.||..|.||..|.||.|.|.:.:...:..|
Mouse   320 SSGLREHQRVVHSGVTPFTCTHCGRAFARAAYLQCHMRTHTGEKPYSCPDCGRCFRQSSDMAAH 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..106 CDD:285071
C2H2 Zn finger 369..389 CDD:275368
C2H2 Zn finger 397..418 CDD:275368
C2H2 Zn finger 442..460 CDD:275368
C2H2 Zn finger 730..750 CDD:275368
C2H2 Zn finger 758..777 CDD:275368
C2H2 Zn finger 1089..1110 CDD:275368 7/43 (16%)
C2H2 Zn finger 1124..1144 CDD:275368 6/19 (32%)
C2H2 Zn finger 1151..1172 CDD:275368 8/20 (40%)
C2H2 Zn finger 1180..1203 CDD:275368 8/50 (16%)
C2H2 Zn finger 1210..1230 CDD:275368 5/19 (26%)
C2H2 Zn finger 1238..1254 CDD:275368 4/15 (27%)
E430018J23RikNP_932128.2 KRAB 22..81 CDD:214630
KRAB 22..61 CDD:279668
C2H2 Zn finger 170..190 CDD:275368 7/19 (37%)
zf-H2C2_2 183..207 CDD:290200 3/23 (13%)
C2H2 Zn finger 198..218 CDD:275368 1/19 (5%)
zf-H2C2_2 210..235 CDD:290200 6/26 (23%)
COG5048 <223..383 CDD:227381 41/162 (25%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 239..259 CDD:290200 7/19 (37%)
C2H2 Zn finger 254..302 CDD:275368 15/50 (30%)
zf-H2C2_2 298..319 CDD:290200 0/20 (0%)
C2H2 Zn finger 310..331 CDD:275368 2/20 (10%)
C2H2 Zn finger 339..359 CDD:275368 5/19 (26%)
zf-H2C2_2 351..376 CDD:290200 11/24 (46%)
C2H2 Zn finger 367..387 CDD:275368 5/17 (29%)
zf-H2C2_2 383..402 CDD:290200 1/1 (100%)
C2H2 Zn finger 395..415 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832249
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.