DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and znf462

DIOPT Version :10

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:XP_002934034.2 Gene:znf462 / 100492944 XenbaseID:XB-GENE-976911 Length:2458 Species:Xenopus tropicalis


Alignment Length:1534 Identity:273/1534 - (17%)
Similarity:450/1534 - (29%) Gaps:614/1534 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 HECQVCGVVLYNRLELKQHIRQH-----------AEGLSYNCKLCSFTSLKQRTLFEHYVTMH-N 192
            :.|..|.:...|..:|:||..:|           ...|.|.|:.||:||...|:|..||..|| .
 Frog   819 YRCLECYIDYNNFEDLQQHYAEHHPEAMNVLNFDQSDLIYRCRFCSYTSPNVRSLMPHYQRMHPT 883

  Fly   193 MPLSQA---EEYV---------KSKHL-----PAPKE---------------------------- 212
            :.::.|   ..||         :|:.|     .|||.                            
 Frog   884 VKINNAMIFSSYVVDRQEELNSESQTLREILNSAPKSMVTSTPTGQGASSSATFNKNSIQPFGTE 948

  Fly   213 -EEVKA-----------VCTLEDMELLIPTVLRPEDYVQPHPHIDNDQ----------LRDIDHQ 255
             |..|:           ||......:....|    .|.:.||    |:          :|.:..:
 Frog   949 TENPKSSVNSVVVYDCDVCKFASPNMHSVLV----HYQKKHP----DEKASYFRIQKTMRVVSVE 1005

  Fly   256 LAVSMDEPVPSVDSLTSTLPPMDTPNVSIGTEYLVLPD------GSLQQVNGSGVVI-------- 306
            .|.::.:....|.|......|:.||||:..:|  |.|:      .|....:..||::        
 Frog  1006 GAAAISQLALEVSSSVQQKSPVPTPNVTSPSE--VTPELYFCKHCSYSNRSVVGVLVHYQKRHPE 1068

  Fly   307 -----EYIDDSKPNSSSNVNV-SLQN--------------------------------------- 326
                 :||..:.|.:::..|| :|||                                       
 Frog  1069 IKVTAKYIRQAPPTAATVRNVDALQNPPIKQPTSTSNSKKGNTQPRGNEMFFCQHCDYGNQTVKG 1133

  Fly   327 -LLSSHNDPMDIDVNELIVEEMMPQIRI-----KPKP-----AVIGTSIH-KHK-----CKFCPK 374
             |:.......|..||..::.:....||.     :.||     |:..||.| |.|     |:.|..
 Frog  1134 VLIHYQKKHRDFKVNADVIRQHTAAIRSMCEQGQKKPVTNTQALPSTSEHDKEKLRSLRCRQCSY 1198

  Fly   375 TFSTVARLKSH--------QLTHSNLPK-----------FFCDQCDFYSLRSADLIQHYKMVH-- 418
            :...|..|:.|        :.|.:::.|           :.|:.|.:.....:.|::||:..|  
 Frog  1199 STPYVYALRKHMKKDHPALRATVTSILKWAFLDGLIEAGYHCEWCIYSHPEPSGLLEHYQKRHPE 1263

  Fly   419 HRVDEN--------GKTGKEQAQGIESRVYSCDMCLFETSTVSQLRTHYKERHTVQPTEVQLRPS 475
            |.||..        |..........||:.|.|..|.||..::..:..||:..|            
 Frog  1264 HYVDYTYMATKLCAGPDCPPNEASTESKSYKCRDCTFEAPSIWDITNHYQAFH------------ 1316

  Fly   476 WTGEPTTTRGVAAKQQTPAKILNHTDIPLGIKYPPGVLETQAPLPQPVVHQPMPDPMQQTEPMAT 540
                |...:|   .:.....|:...|:        ...|......:|.::         .||.  
 Frog  1317 ----PWALKG---NESVLFNIIKEKDV--------NSEEASYSAEKPTIN---------VEPQ-- 1355

  Fly   541 TSTTITESGDINVVVDATPLFYAATSNSLLVTNPAPVTTVEETTGTASNHAFGIFPEISEGN--L 603
                 .:||| :.::.........|:||.|.::|...|...    :..|:..|:.....:.:  :
 Frog  1356 -----MDSGD-DFILSQGKTLPLQTNNSALSSSPYLCTVCH----SEYNNLHGLLTHYGKKHPGM 1410

  Fly   604 PVNEAVQQAPANSSSVSVFGDMQDFIDNTDVAAICTIPADGMPVVD----GDDIVIDNNNISLDF 664
            .|..|                  ||....|:...........|.::    |........:.|:..
 Frog  1411 KVKAA------------------DFAQEVDINPGAVYKCRHCPYINTRIHGVLTHYQKRHPSVKV 1457

  Fly   665 DAENLFEDFEEEEDDTVADEEDEADNEDENDNNDAATDQNLLLTSDDDDVDDFDDEQSKHLQKPY 729
            .||:...|.|:..:          .:::|:|                                  
 Frog  1458 TAEDFVHDVEQSTE----------MSQNESD---------------------------------- 1478

  Fly   730 CIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIKHYKTVHKRMPTRDMVQAKGDK 794
                          ||.....:|...|||::|...:.....|..||:..|.: |..||:.:..|.
 Frog  1479 --------------ENSRIFKQGYGAYRCKICPYTHGTLEKLKIHYEKYHDQ-PEPDMLSSPKDF 1528

  Fly   795 VSVARTNIEKLYPGR---------IKNP------------MLMCAKCPFECESDSEMRKHLNAHH 838
            .||....:...:|.:         :|.|            :..|..|.:.|.:    ||.:..|:
 Frog  1529 ASVETDVLLDEHPPQTVVTLEAAVVKGPTKYKRNHMAPHTVFRCQLCKYFCST----RKGIARHY 1589

  Fly   839 GINDGVSEHANEVFIIRKLP------FECPRCIRSFAAKTTLSRHLQRSHLVDTIIEMQTPHCGE 897
            .|     :|.|    :|..|      |:|..|..:...:..|:.|.|:.|.:|...    .||  
 Frog  1590 RI-----KHNN----VRAQPEGKNNLFKCALCSYTNPIRKGLAAHYQKRHDIDAYY----THC-- 1639

  Fly   898 AITTTMATSSSTISEPVNSVTVDG-QHNEMMQTDVGAEKMTE----------------------- 938
                  ..:|.|:|:..|.|.:.. |.::.::.....:|..|                       
 Frog  1640 ------LAASRTVSDKPNKVVIPSPQKDDSLELSEELKKAVEMKKCSLCSFQSYSKKGIVTHYMK 1698

  Fly   939 -------------ALGN------GDGNEEGGTDDGTGVKAEPAVPEEELDPVTLDAATAVTTTAI 984
                         .|||      .:.||:..|::.|  :.||...|:||.|.     ..:....:
 Frog  1699 RHPGVFPKKQYGSKLGNYFTTVYAEENEQPATEEAT--ETEPEPQEQELLPF-----RCIKCFKL 1756

  Fly   985 AAAISAAAAATATSLESPVATTASSSTTLFPTPTPFDFDYDIMRDEAQQSSPNIHDVSKALSDNA 1049
            :.:.:.......|...|.                      ||.||                    
 Frog  1757 SFSTAELLCMHYTDHHSK----------------------DIKRD-------------------- 1779

  Fly  1050 SSSCPINESYKLLSTTALETSPAKGLRSNSRLHRSSIHICKLCNQTFDELGKLVKH--------- 1105
                     :.:|.|:        |.||.:..::     ||.||...:.:..|..|         
 Frog  1780 ---------FSVLGTS--------GTRSLTTTYQ-----CKHCNSKLNSVADLTIHLNAHNEDFQ 1822

  Fly  1106 ------------------------------EMELH-SNTERSRWGYQHKCAICNTSYRTLTLLKF 1139
                                          |..|| |..|::..||  ||..|...:.||..:..
 Frog  1823 KRAKRQERRKQLLNKQKLTEIAENKEKMGNEAALHKSCKEKAVVGY--KCKFCVEVHPTLRAICN 1885

  Fly  1140 HMKRH------------------------------------------------------------ 1144
            |:::|                                                            
 Frog  1886 HLRKHVQYGNVPELSSDLQDEKYEFTDEDTIEYDYDDGVDDEEEEDVEEASTPAEENPVDEAKET 1950

  Fly  1145 -SNRKSQ-----CKLCPKSFVTIAELERHTK-----AKHSKDKTLRCFMDGCRKTFAFKHHLIRH 1198
             ..|:::     ||.|.:..:::..|..|.:     |..::|....|  ..|....||:|:|.||
 Frog  1951 KKGRRTRPGGYPCKQCDRVLMSMQGLRSHERSHLALAMFTRDDKYSC--QFCSFVSAFRHNLDRH 2013

  Fly  1199 QKASHLSTR-YICPVCNKEEKSNVHLKNH-MSVHKGEITYKCPKCDRSYLRRGRLVTHALIIHDL 1261
            .:..|...: :.|.:|..:...|..||.| |..|.||..|||..|..|.:...:|..|:|.:|..
 Frog  2014 VQTHHGHHKPFRCKLCPFKSSYNSRLKTHIMKAHAGEHAYKCSFCPFSTMTISQLKDHSLKVHGK 2078

  Fly  1262 RFTTEELGNLSSLATNQARPNDLKVATPVGLLDGRKDVS 1300
            ..|...:..:|     |..|. .|..|.:|...|..|.|
 Frog  2079 TLTLPRIRTIS-----QTSPR-AKQTTRIGKESGLDDSS 2111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..103 CDD:214871
C2H2 Zn finger 369..389 CDD:275368 5/27 (19%)
C2H2 Zn finger 397..418 CDD:275368 5/20 (25%)
C2H2 Zn finger 442..460 CDD:275368 5/17 (29%)
C2H2 Zn finger 730..750 CDD:275368 2/19 (11%)
C2H2 Zn finger 758..777 CDD:275368 5/18 (28%)
C2H2 Zn finger 1089..1110 CDD:275368 7/59 (12%)
C2H2 Zn finger 1124..1144 CDD:275368 5/19 (26%)
C2H2 Zn finger 1151..1172 CDD:275368 6/25 (24%)
C2H2 Zn finger 1180..1203 CDD:275368 8/22 (36%)
C2H2 Zn finger 1210..1230 CDD:275368 7/20 (35%)
C2H2 Zn finger 1238..1254 CDD:275368 4/15 (27%)
znf462XP_002934034.2 C2H2 Zn finger 1963..1983 CDD:275370 5/19 (26%)
C2H2 Zn finger 1997..2017 CDD:275368 8/21 (38%)
C2H2 Zn finger 2026..2047 CDD:275368 7/20 (35%)
C2H2 Zn finger 2055..2076 CDD:275368 6/20 (30%)
C2H2 Zn finger 2221..2241 CDD:275368
C2H2 Zn finger 2267..2287 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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