DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and znf423

DIOPT Version :10

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:XP_002937417.2 Gene:znf423 / 100491000 XenbaseID:XB-GENE-490169 Length:1289 Species:Xenopus tropicalis


Alignment Length:210 Identity:44/210 - (20%)
Similarity:75/210 - (35%) Gaps:66/210 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KEPDNASK--SCKSRGSNLRVHFKNTRETALAIKRMPLRRAQRFLKNVIEKKECVPFRRFNGGVG 68
            |:..||.|  :.|......|..:|..:|:           .||||:| .||.             
 Frog   393 KQAFNAYKVQTEKEEKEEARSKYKEAKES-----------FQRFLEN-HEKM------------- 432

  Fly    69 RCAQAKHWGTSVGRWPKKSAEFLLQLLKNAEANADYKGLDVDRL-VINHIQVNRAPCLRRRTYRA 132
                     ||..|:.|....|....:.||.:..|...:..|.| .::..:..:|..||:|.:.|
 Frog   433 ---------TSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEA 488

  Fly   133 HGRINPYMSSPCHI--------------------ELSLTEKEDVV------TKATDESEQAKKKL 171
            ...|...|::..:.                    ||...:|||.:      .:|.::.|:.:|  
 Frog   489 LKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEK-- 551

  Fly   172 SKKKLQRQKEKMMRN 186
             :|.|.|::.:..:|
 Frog   552 -QKSLLRERRRQRKN 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..103 CDD:214871 16/77 (21%)
C2H2 Zn finger 369..389 CDD:275368
C2H2 Zn finger 397..418 CDD:275368
C2H2 Zn finger 442..460 CDD:275368
C2H2 Zn finger 730..750 CDD:275368
C2H2 Zn finger 758..777 CDD:275368
C2H2 Zn finger 1089..1110 CDD:275368
C2H2 Zn finger 1124..1144 CDD:275368
C2H2 Zn finger 1151..1172 CDD:275368
C2H2 Zn finger 1180..1203 CDD:275368
C2H2 Zn finger 1210..1230 CDD:275368
C2H2 Zn finger 1238..1254 CDD:275368
znf423XP_002937417.2 COG5048 <141..246 CDD:227381
C2H2 Zn finger 142..162 CDD:275368
C2H2 Zn finger 170..190 CDD:275368
COG5048 196..601 CDD:227381 44/210 (21%)
C2H2 Zn finger 198..218 CDD:275368
C2H2 Zn finger 226..246 CDD:275368
C2H2 Zn finger 267..286 CDD:275368
C2H2 Zn finger 299..316 CDD:275368
C2H2 Zn finger 417..438 CDD:275368 10/54 (19%)
C2H2 Zn finger 449..470 CDD:275368 5/20 (25%)
C2H2 Zn finger 488..509 CDD:275368 3/20 (15%)
C2H2 Zn finger 525..546 CDD:275368 4/20 (20%)
C2H2 Zn finger 640..660 CDD:275368
C2H2 Zn finger 670..690 CDD:275368
C2H2 Zn finger 700..717 CDD:275368
C2H2 Zn finger 728..749 CDD:275368
C2H2 Zn finger 758..779 CDD:275368
C2H2 Zn finger 789..809 CDD:275368
C2H2 Zn finger 815..833 CDD:275368
C2H2 Zn finger 893..914 CDD:275368
C2H2 Zn finger 937..957 CDD:275368
C2H2 Zn finger 966..986 CDD:275368
C2H2 Zn finger 1205..1225 CDD:275368
C2H2 Zn finger 1236..1257 CDD:275368
C2H2 Zn finger 1266..1282 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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