DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30020 and Zfp160

DIOPT Version :10

Sequence 1:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster
Sequence 2:XP_063133080.1 Gene:Zfp160 / 100365363 RGDID:2319215 Length:670 Species:Rattus norvegicus


Alignment Length:571 Identity:116/571 - (20%)
Similarity:189/571 - (33%) Gaps:188/571 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   721 QSKHL---------QKPY-CIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIKHY 775
            |:.||         :||| |..|.|.|:.:....:|:.:|.|..||:|..|..:::....|    
  Rat   213 QNSHLKSHRRIHTGEKPYKCNDCGKAFSVRSNLTHHLVIHTGDKPYKCNECGKVFSQTSSL---- 273

  Fly   776 KTVHKRMPTRDMVQAKGDKVSVARTNIEKLYPGRIKNPMLMCAKCPFECESDSEMRKHLNAHHGI 840
             |:|:|..|       |:|                          |:.|   :|..|..::|..:
  Rat   274 -TIHRRTHT-------GEK--------------------------PYRC---NECGKVFSSHSNL 301

  Fly   841 NDGVSEHANEVFIIRKLPFECPRCIRSFAAKTTLSRHLQRSHLVDTIIEMQTPHCGEA------I 899
            |...:.|..|      .|::|..|.:.|...:.|:.| .|:|..:.  ..:...||:|      :
  Rat   302 NTHQAIHTGE------KPYKCSECGKVFTQNSHLANH-WRTHTGEK--PYKCNECGKAFSVYSSL 357

  Fly   900 TTTMATSSST---ISEPVNSVTVDGQHNEMMQTDVGAEKMTEALGNGDGNEEGGTDDGTGVKAEP 961
            ||.:|..:..   ..|....|.....|                |.|..|...|            
  Rat   358 TTHLAIHTGEKPYKCEECGKVFTQNSH----------------LANHRGIHSG------------ 394

  Fly   962 AVPEEELDPVTLDAATAVTTTAIAAAISAAAAATATSLESPVATTASSSTTLFPTPTPFDFDYDI 1026
                                                  |.|.                       
  Rat   395 --------------------------------------EKPY----------------------- 398

  Fly  1027 MRDEAQQSSPNIHDVSKALSDNASSSCPINESYKLLSTTALETSPAKGLRSNSRLHRSSIHI--- 1088
               :.::...:.:..|     |.:....::...|....:  |...|..:||:...|: .||.   
  Rat   399 ---KCEECGKHFNQTS-----NLARHWRVHTGEKPYKCS--ECGKAFSVRSSLTSHQ-VIHTGEK 452

  Fly  1089 ---CKLCNQTFDELGKLVKHEMELHSNTERSRWGYQHKCAICNTSYRTLTLLKFHMKRHSNRKS- 1149
               |..|.:.|.:...|..|: .:|:..:      .::|..|..::.:.:.|..|...|:.:|. 
  Rat   453 PYKCAECGKVFSQTSSLSIHQ-RIHTGEK------PYRCNECGKAFNSHSNLNTHQVIHTGQKPY 510

  Fly  1150 QCKLCPKSFVTIAELERHTKAKHSKDKTLRCFMDGCRKTFAFKHHLIRHQKASHLSTR-YICPVC 1213
            :|..|.|.|...:.|..|.:. |:.:|..:|  :.|.|.|:....|..|| |.|...: :.|..|
  Rat   511 KCLECGKVFTQNSHLANHHRT-HTGEKPYKC--NECGKAFSVYSSLTTHQ-AIHTGEKPFKCNEC 571

  Fly  1214 NKEEKSNVHLKNHMSVHKGEITYKCPKCDRSYLRRGRLVTHALIIHDLRFT 1264
            .|....|.||.:|...|.||..|||.||.:::..|..|.||..||.:...|
  Rat   572 GKVFTQNSHLASHRRTHTGEKPYKCSKCGKAFSVRSSLTTHQAIILEKNLT 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30020NP_610627.2 zf-AD 25..103 CDD:214871
C2H2 Zn finger 369..389 CDD:275368
C2H2 Zn finger 397..418 CDD:275368
C2H2 Zn finger 442..460 CDD:275368
C2H2 Zn finger 730..750 CDD:275368 5/19 (26%)
C2H2 Zn finger 758..777 CDD:275368 3/18 (17%)
C2H2 Zn finger 1089..1110 CDD:275368 5/20 (25%)
C2H2 Zn finger 1124..1144 CDD:275368 4/19 (21%)
C2H2 Zn finger 1151..1172 CDD:275368 6/20 (30%)
C2H2 Zn finger 1180..1203 CDD:275368 8/22 (36%)
C2H2 Zn finger 1210..1230 CDD:275368 7/19 (37%)
C2H2 Zn finger 1238..1254 CDD:275368 5/15 (33%)
Zfp160XP_063133080.1 None
Blue background indicates that the domain is not in the aligned region.

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