DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18004 and Ino80e

DIOPT Version :10

Sequence 1:NP_610625.1 Gene:CG18004 / 36154 FlyBaseID:FBgn0033566 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001013922.1 Gene:Ino80e / 293494 RGDID:1359572 Length:244 Species:Rattus norvegicus


Alignment Length:235 Identity:89/235 - (37%)
Similarity:114/235 - (48%) Gaps:41/235 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GLGAGETDFKERYKNLKKKLKFLIYENEYFQDLLHTNQRRLLKVSRDRTFLLDRLLVYEKPAKDS 118
            |...||.|:|::|:|||:||||||||:|.||:.|...||:|||||||::|||||||.||...:||
  Rat     3 GPADGEVDYKKKYRNLKRKLKFLIYEHECFQEELRKAQRKLLKVSRDKSFLLDRLLQYENVDEDS 67

  Fly   119 SDSDATDSSDSEPASTSGVAGGSQTSKDAIRRKHKDKGAPGIP---GVPPH----MPTVGAPRGR 176
            ||||||.|||:  :.|.|....|.|.....:|.....|||. |   .:||.    :.|.|||...
  Rat    68 SDSDATASSDN--SETEGTPKLSDTPAPKRKRSPPMGGAPS-PSSLSLPPSSGFPLQTSGAPSPY 129

  Fly   177 RRKILTGMLPANHGIPAIAAKKQLTATVSPSQQPPQLQTAPK-------DVSP------------ 222
            ...:.:...|.   .|:.....||.   .||...|:|:..|:       .|.|            
  Rat   130 LSSLASPPYPP---FPSDYLALQLP---EPSPLRPKLEKRPRLPRKLKMAVGPPDCPVGGPLAFP 188

  Fly   223 --GLSQAEIARQLQERRPTPLELLSPECTSATVPTTMLSD 260
              | |.|.:...|   .|.|...:.|....:|||..|.||
  Rat   189 ARG-SGASVGAAL---TPLPPPKMPPHTILSTVPQQMFSD 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18004NP_610625.1 None
Ino80eNP_001013922.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..179 39/128 (30%)

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