DRSC/TRiP Functional Genomics Resources

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Protein Alignment LTV1 and AT3G49990

DIOPT Version :9

Sequence 1:NP_001286300.1 Gene:LTV1 / 36146 FlyBaseID:FBgn0027525 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_190568.1 Gene:AT3G49990 / 824161 AraportID:AT3G49990 Length:502 Species:Arabidopsis thaliana


Alignment Length:571 Identity:143/571 - (25%)
Similarity:214/571 - (37%) Gaps:185/571 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GKKPYIDRKKAVTFHLVHRSQHDPLVTDENAPQRVLLEAAARQQKP--------KDPEPPTD--- 57
            |||.:||:|||.||.|..|...||..:|.....::.|..   .|.|        :|.|...|   
plant     2 GKKKFIDKKKAATFELCPRDTSDPRYSDAPGGDKIFLRV---DQNPVNINGFIEEDEEEEGDSSR 63

  Fly    58 ----------------------PAQRQEELKKFGIHFDDDYDYMQHLKKRENDVVW-EFMENPNQ 99
                                  ||..::|:.:.| :.||.|:|::||::.:|.... .|..||..
plant    64 FDDAPEEMDYGYSSFGDSSSSLPAHVRKEILELG-YPDDGYNYLEHLREIKNTGGGSNFYVNPKY 127

  Fly   100 ARKQKVQDSEKPGPAPKLMLPSSVFASEFEESEGMLNK----AAPQTLRLD----WDPDVVAALD 156
            ...|..:|       .|....|.|..|.....||..||    .|.:|:.:.    .||:|.|.|:
plant   128 EVAQLPRD-------VKAYDASRVKISGMVNEEGNDNKLMYSVASKTVNVKVQKAIDPEVAALLE 185

  Fly   157 SD------CENEELEDDFVIQA-----------------------MAEGDSD------------- 179
            :.      .:.|:||:|||:||                       :.|.:||             
plant   186 NSDGSEFGSDVEDLEEDFVVQANLTQKGESSGVSNGELEFSVRREVRERESDEPVAENPRVPRQI 250

  Fly   180 DEEWDD-EDGEEQSDMDFD---SDDLNEDENEDELMDRLAPLMRERRFDDEEVKSRFTEYSMSSS 240
            ||.:|. |..|..||.|.|   ::|..|:|.||.:...:..|:..:. .|.|::.::    |:.:
plant   251 DELFDQLELNEYGSDSDGDGYIAEDGEEEEEEDFMAQEVQNLIHGKA-KDYELEEKY----MNPA 310

  Fly   241 VIRRNEQLSLLDDRFEKFYATYDDPELGDLALEDIEGNWHQKHPVVMQCFQEFKKKDKGIEYNKE 305
            .|.:|..             :..|.|..|.|...|.                     :.:||.:.
plant   311 DILKNSD-------------SVRDKEEVDTAAHVIR---------------------RTVEYGEN 341

  Fly   306 WDRERIEKYRNVVEGEEDPTEELVEYEVDDPKQKKWDCESILSTYSNIYNHP-KVI-DEPRRSRR 368
            :|           .|.||...||.|...|:  .:|.|||:|:|||||:.|.| |:: .|..|.::
plant   342 FD-----------NGNEDEFVELTEESSDE--SEKHDCETIVSTYSNLDNLPGKILAAESARQKK 393

  Fly   369 ------SSASTNPAPIQIDPKTGLPTNVLRGGVDGQLTAKALANLADESPAATGPKSLCAKSVLS 427
                  ::.|:|...|.:..:..:|...|.|....|...||      |.|.|.            
plant   394 LSETLANALSSNGRIINLQGRERIPVEFLPGRRAEQTDVKA------EIPKAE------------ 440

  Fly   428 TLSVLSIRPK---DETHEEKKERKRLLKDYRNERRIEKKANTEAFKEEKKR 475
                 .|:.|   .|:.|||||||..:|..:.|.||.||.....:..|.:|
plant   441 -----PIKRKTHGQESKEEKKERKNAVKAEKREARIIKKQTKMLYCGETQR 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LTV1NP_001286300.1 LTV 10..462 CDD:282087 135/550 (25%)
AT3G49990NP_190568.1 LTV 98..382 CDD:282087 85/342 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 73 1.000 Domainoid score I3294
eggNOG 1 0.900 - - E1_KOG2637
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 87 1.000 Inparanoid score I2328
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D917248at2759
OrthoFinder 1 1.000 - - FOG0005029
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21531
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3551
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.930

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