DRSC/TRiP Functional Genomics Resources

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Protein Alignment LTV1 and Ltv1

DIOPT Version :10

Sequence 1:NP_610620.1 Gene:LTV1 / 36146 FlyBaseID:FBgn0027525 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_001014179.1 Gene:Ltv1 / 361452 RGDID:1311264 Length:470 Species:Rattus norvegicus


Alignment Length:528 Identity:211/528 - (39%)
Similarity:285/528 - (53%) Gaps:103/528 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KKPYIDRKKAVTFHLVHRSQHDPLVTDENAPQRVLLEAAARQQKPKDPEPPTDPAQRQEELKKFG 69
            |||:|::||||:||||||||.|||..||.||||||:..    ||..|.|       |:.|.:|:|
  Rat     6 KKPFIEKKKAVSFHLVHRSQRDPLAADETAPQRVLVPT----QKVNDEE-------RRAEQRKYG 59

  Fly    70 IHFDDDYDYMQHLKKRENDVVWEFMENPNQARKQKVQDSEKPGPAPKLMLPSSVFASEFEESEGM 134
            :.|||||||:|||::............|:....:..:|: ...|:..:.||||||||||||..|:
  Rat    60 VFFDDDYDYLQHLREPSGPAELIPSSTPSTYSSRGEEDT-SVFPSTGIKLPSSVFASEFEEDVGL 123

  Fly   135 LNKAAPQT-LRLDWDPDVVAALDSDCENEE----LEDDFVIQA----------MAEGDSDD-EEW 183
            ||||||.: .|||:|||:|||||.|.:.::    |||||::||          |.|.|.|| .||
  Rat   124 LNKAAPVSGPRLDFDPDIVAALDDDFDFDDPENLLEDDFILQASKPTGGEGMDMLESDGDDGNEW 188

  Fly   184 DDEDGEEQSDMDFDSDDLNEDENEDELMDRLAP-----LMRERRFDDEEVKSRFTEYSMSSSVIR 243
            :|.| |..||....:..|::..      |..||     .|::..|.:||.|||||||||:|||:|
  Rat   189 EDMD-EGGSDGCGSTGPLSDGG------DISAPGSPREAMKKHLFWEEETKSRFTEYSMTSSVMR 246

  Fly   244 RNEQLSLLDDRFEKFYATYDDPELGDLALEDIEGNWHQKHPVVMQCFQEFKKKDKGIEYNKEWDR 308
            |||||:|.|:||||||..|||.|:|.|...::||........:.:...::.|             
  Rat   247 RNEQLTLHDERFEKFYEQYDDVEIGALDNAELEGTIQVDSSRLQEVLNDYYK------------- 298

  Fly   309 ERIEKYRNVV----------------EGEEDPTEELVEYEVDDPKQKKWDCESILSTYSNIYNHP 357
               ||..|.|                |.:|...||.|...:::.:: |||||||.|||||:||||
  Rat   299 ---EKAENCVKLNTLEPFEDQDLAANELDESEKEETVTVVLEEARE-KWDCESICSTYSNLYNHP 359

  Fly   358 KVID-EPRRSRRSSASTNPAPIQIDPKTGLPTNVL--RGGVDGQLTAKALANLADESPAATGPKS 419
            ::|. ||:          |..|.:..|||:|.:||  :|....|:....:.|.:|....:|.|  
  Rat   360 QLIKYEPK----------PKQIHLSSKTGIPLHVLPKKGLTAKQVERMQMINSSDLPKVSTQP-- 412

  Fly   420 LCAKSVLSTLSVLSIRPKDETHEEKKERKRLLKDYRNERRIEKKANTEAFKEEKKRQTHVKINQR 484
                           |.|.|:.|:||.||:.:|:.|.|||:|||||..|||.||:||....:|.:
  Rat   413 ---------------RLKTESKEDKKARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELLNLK 462

  Fly   485 TNQQGASI 492
            .|.:|..:
  Rat   463 KNVEGLKL 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LTV1NP_610620.1 LTV 10..356 CDD:461211 159/382 (42%)
Ltv1NP_001014179.1 LTV 15..358 CDD:461211 157/378 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..54 19/41 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..103 2/28 (7%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..209 14/43 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 399..437 15/54 (28%)

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