DRSC/TRiP Functional Genomics Resources

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Protein Alignment LTV1 and ltv1

DIOPT Version :10

Sequence 1:NP_610620.1 Gene:LTV1 / 36146 FlyBaseID:FBgn0027525 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_593949.1 Gene:ltv1 / 2541634 PomBaseID:SPAC3F10.17 Length:386 Species:Schizosaccharomyces pombe


Alignment Length:335 Identity:108/335 - (32%)
Similarity:165/335 - (49%) Gaps:70/335 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GKKPYIDRKKAVTFHLVHRSQHDPLVTDENAPQRVLLEA-----AARQ--QKPKDPEPPTDPAQR 61
            |||.::::.||.|||||||||.||...||||.:|||:.|     .||:  ::..|.|..:.....
pombe     2 GKKKFVNKNKAQTFHLVHRSQRDPQYHDENATERVLVSAETLNKTARRLNRQTLDEEYGSTIRPN 66

  Fly    62 QEELKKFGIHFDD-DYDYMQHLKKREN-DVVWEFMENP------NQARKQKVQDSEKPGPAPKLM 118
            :.|...:||:||| :|||||||:...| |..|  :|.|      ::.:||::|..::|...|:.:
pombe    67 EGEAANYGIYFDDTEYDYMQHLRNIGNEDATW--VEAPATRKTQDKQKKQQIQLRDQPSILPQEV 129

  Fly   119 LPSSVFASEFEESEGMLNKAAPQTL---RLDWDP---DVVAALD-SDCENEELED---------- 166
            |||.|......:.:    ::.|..:   :.|.||   :|:..|: ||..:||..|          
pombe   130 LPSEVELERTYQDQ----QSVPDAISGFQPDMDPRLREVLEQLEHSDINDEETSDFDEEFEKLVA 190

  Fly   167 -------DFVIQA-MAEGDSD-DE---------EWDDE------DGEEQSDM---DFDSDDLNED 204
                   :|..|. :.||:.| ||         ||:.|      :.::|.|:   |.|..|..|.
pombe   191 SGKADESEFYAQPFVEEGEKDYDEAAAAKAGKSEWEIEFEKFKLEQKKQPDVASSDGDFSDEPES 255

  Fly   205 ENEDELMDRLAPLMRERRFDDEEVKSRFTEYSMSSSVIRRNEQLSLLDDRFEKFYATY----DDP 265
            |..||:.: |....:.:.....:.::..:..|||||.:.|||.|:||||||:|....|    |:.
pombe   256 EERDEVPE-LVSSSKSKSKTKRKARTALSSVSMSSSALFRNEGLTLLDDRFDKVEEEYTPIKDER 319

  Fly   266 ELGDLALEDI 275
            ||.|...:|:
pombe   320 ELIDPDQKDV 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LTV1NP_610620.1 LTV 10..356 CDD:461211 105/329 (32%)
ltv1NP_593949.1 LTV 8..349 CDD:461211 105/329 (32%)

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