DRSC/TRiP Functional Genomics Resources

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Protein Alignment LTV1 and T23D8.3

DIOPT Version :9

Sequence 1:NP_001286300.1 Gene:LTV1 / 36146 FlyBaseID:FBgn0027525 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_492637.1 Gene:T23D8.3 / 172857 WormBaseID:WBGene00011944 Length:410 Species:Caenorhabditis elegans


Alignment Length:513 Identity:143/513 - (27%)
Similarity:224/513 - (43%) Gaps:146/513 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KKPYIDRKKAVTFHLVHRSQHDPLVTDENAPQRVLLEAAARQQKPKDPEPPTDPAQRQEELKKFG 69
            :|.:||:|.:.:|.||..::.                   |.::.|    ||.  :..||.:|:|
 Worm     4 RKAFIDKKASQSFRLVPDNRE-------------------RSERFK----PTQ--EHLEEQQKYG 43

  Fly    70 IHFDDDYDYMQHLKKRENDVVWEFMENPNQARKQKVQDSEKPGPAPKLM-LPSSVFASEFEESEG 133
            :::||||||:||::.....:..|.:....:....|...|....|||.|. |..::...||     
 Worm    44 VYYDDDYDYLQHMRAVNEPMKLENVHEEVEKTTIKTSGSSAFPPAPPLFGLVGALKKPEF----- 103

  Fly   134 MLNKAAPQTLRLDWDPDVVAALD---SDCENEELEDDFVIQAMAEG----------------DSD 179
                         :|.||..||:   .|....||||:|:  .:|.|                ||:
 Worm   104 -------------FDEDVANALEEVTDDRNTGELEDNFI--TLAGGLLDERTTVYRSTRRGEDSE 153

  Fly   180 DEEWDDEDGEEQSDMDFDSDDLNEDENEDELMDRLAPLMRERRFDDEEVKSRFTEYSMSSSVIRR 244
            :||.||||           |::.:|.|:|||                     |.|.::....:.|
 Worm   154 EEEDDDED-----------DEMYDDYNDDEL---------------------FGEEAVGEIRVER 186

  Fly   245 NEQLSLLDDRFEKFY-ATYDDPELGDLALED------IEGNWHQKHPVVMQCFQEFKKKDKG--- 299
            .:| .::|:.||:.. ..|:..::|:|..:|      :|.|..:.|.::         .|||   
 Worm   187 ADQ-RVIDNAFEELMDREYNTDQIGELDGDDYDVGGALEPNAGRLHKLI---------NDKGPSN 241

  Fly   300 IEYNKEWDRERI-EKYRNVVEGEEDPTEELVEYEVDD--PKQKKWDCESILSTYSNIYNHPKVID 361
            .||::|..:..: |:.|.:.||.....||....|||:  .|:.||||||..:.|:||||||.:|.
 Worm   242 AEYDEELAKHYVRERMRLIEEGVIKDKEEYEIVEVDEGTNKKMKWDCESFATQYTNIYNHPTLIK 306

  Fly   362 EPR-RSRRSSASTNPAPIQIDPKTGLPTNVLRGGVDGQLTAKALANLADESPAATGPKSLCAKSV 425
            ||| .||::....:.|..::|        :.....|.           ||.......|    :||
 Worm   307 EPRGLSRKALKRFDKAVEEMD--------IAEEDEDD-----------DEDMEDDDDK----ESV 348

  Fly   426 LSTLSVLSIRPKDETHEEKKERKRLLKDYRNERRIEKKANTEAFKEEKKRQTHVKINQ 483
            .||:|  :.|||:||.|::..||:.:|:.|..||:|||||...|.|||::....:|.|
 Worm   349 FSTVS--TFRPKNETPEQRSLRKKAVKEARKLRRVEKKANKTMFAEEKRKLAKGRIGQ 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LTV1NP_001286300.1 LTV 10..462 CDD:282087 130/485 (27%)
T23D8.3NP_492637.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161273
Domainoid 1 1.000 94 1.000 Domainoid score I4729
eggNOG 1 0.900 - - E1_KOG2637
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6338
Inparanoid 1 1.050 136 1.000 Inparanoid score I3135
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51932
OrthoDB 1 1.010 - - D403171at33208
OrthoFinder 1 1.000 - - FOG0005029
OrthoInspector 1 1.000 - - oto20440
orthoMCL 1 0.900 - - OOG6_104128
Panther 1 1.100 - - LDO PTHR21531
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R673
SonicParanoid 1 1.000 - - X3551
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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