DRSC/TRiP Functional Genomics Resources

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Protein Alignment alka and glra4a

DIOPT Version :10

Sequence 1:NP_610619.2 Gene:alka / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001429032.1 Gene:glra4a / 83413 ZFINID:ZDB-GENE-010410-3 Length:457 Species:Danio rerio


Alignment Length:465 Identity:153/465 - (32%)
Similarity:229/465 - (49%) Gaps:67/465 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AFISFGLGFI-LMWLSEATEAHMNYTAKPRVVLPPN------------YVKEIRPPSKKGSPVIV 60
            :|..|..||| |....|..::......||   :.|:            |...|| |:.||.||.|
Zfish    13 SFFFFQGGFIRLGSCKEEIKSSSRPAQKP---MSPSDFLDKLMGRTSGYDARIR-PNFKGPPVNV 73

  Fly    61 DFSIFVVDINSINVEDMDFRVDMFIHQRWLESRL---EIPDDIFEEGDDYVTLLPEVFENFWQPD 122
            ..:||:....||....||:|:::|:.|:|.:.||   |.||...:       |.|.:.::.|:||
Zfish    74 TCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYSEYPDASLD-------LDPSMLDSIWKPD 131

  Fly   123 PYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSN 187
            .:|.|.|.|....:|.....:.:::|..|.|:.|:..|::|.|:.:.:|||||.|.:.:|||...
Zfish   132 LFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYT 196

  Fly   188 NQKVKLRW-SDSGVTLNPELKLLQYNLGQPLELEESD-GYMPE--KVGNFSRLTVYFRFERQIGH 248
            ...:...| ||:.|.:..:|.|.|:.|     .||.| ||..:  ..|.|:.:.|.|..|||:|:
Zfish   197 MNDLIFEWLSDNPVQVADDLTLPQFVL-----KEEKDLGYCTKHYNTGKFTCIEVKFHLERQMGY 256

  Fly   249 HLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTG--ADIPPVAYVKALDLWM 311
            :|||.:.||.|:|:|||.|||:.:||.|.||.|.:|.:||:.|..:|  |.:|.|:||||:|:||
Zfish   257 YLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWM 321

  Fly   312 AGCMLSVFAALAEFVVVKVLDVQYQYQVNRIPKVLPMRISNMEKGQCATVASWEGGAVRSRKATQ 376
            |.|:|.|||||.|:..|..:..|::..:....|....||..      ..|....|...|......
Zfish   322 AVCLLFVFAALLEYAAVNFVSRQHKEFIRLRKKQRRQRIEE------ELVRESRGFYFRGYGLGH 380

  Fly   377 TPTTPGQTSLQGNG--GPPKP--------ARRQSLLSVAWTDTDTGVEKIMWREIDKVSRAVFPI 431
            ...|...|:::|:.  .||.|        |.|:..:..|             :.||.:||||||:
Zfish   381 CLQTKDGTAVEGSSVFAPPPPVQVLYDGEAVRKRFVDRA-------------KRIDTISRAVFPL 432

  Fly   432 LFFVFVLLYW 441
            .|.:|.:.||
Zfish   433 SFLIFNVFYW 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alkaNP_610619.2 LIC 8..441 CDD:455710 151/463 (33%)
glra4aNP_001429032.1 None

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