Protein Alignment alka and Gabrp

DIOPT Version :10

• Sequence 1: NP_610619.2
• Gene: alka / 36145
• FlyBaseID: FBgn0033558
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_112291.1
• Gene: Gabrp / 81658
• RGDID: 620532
• Length: 440
• Species: Rattus norvegicus
• Alignment Length: 429
• Identity: 116/429 - (27%)
• Similarity: 210/429 - (48%)
• Gaps: 65/429 - (15%)

  Fly    40 LPPNYVKEIRPPSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEG 104
            |...|.|.:| |:..|.||.:..::.:..|:||:..:||:...:::.|||.:.||     :| ||
  Rat    44 LTAGYNKFLR-PNFGGDPVRIALTLDIASISSISESNMDYTATIYLRQRWTDPRL-----VF-EG 101

  Fly   105 DDYVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQL 169
            :...||...:.|..|.||.|.:.||.:.:..:|.....:.|:.|.||.||.|:...:.|.|:...
  Rat   102 NKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVTCNMDLSK 166

  Fly   170 YPMDIQVCPIYIESFSSNNQKVKLRW---SDSGVTLNPELKLLQYNLGQPLELEESDGYMPEKVG 231
            ||||.|.|.:.:||:..:...|:..|   :||...|. .|:|.||.:.|...|..   ...::.|
  Rat   167 YPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLE-NLRLAQYTIQQYFTLVT---VSQQETG 227

  Fly   232 NFSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTGA 296
            |::||.:.|...|.:.:.:::|:.||:.:|:|||.|||:.|:::|.|..:.||.:|::.|:..|:
  Rat   228 NYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLESVPARTCIGVTTVLSMTTLMIGS 292

  Fly   297 --DIPPV-AYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQYQYQVNRIP--KVLPMRISNMEKG 356
              .:|.. .::||:|:::..|...||.||.|:.|.....:|.....:|.|  ....:.|:|:..
  Rat   293 RTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAVKDRGPAKDSEEVNITNIIN- 356

  Fly   357 QCATVASWEGGAVRSRKATQTPTTPGQTSLQGNGGPPKPARRQSLLSVAWTDTDTGVE---KIMW 418
              ::::|::      ||.:       ..|::.:|.           :|.::|......   |.::
  Rat   357 --SSISSFK------RKIS-------FASIEISGD-----------NVNYSDLTMKASDKFKFVF 395

  Fly   419 RE----------------IDKVSRAVFPILFFVFVLLYW 441
            ||                :|:.|:.:||::|.:..:.||
  Rat   396 REKIGRIIDYFTIQNPSNVDRYSKLLFPLIFMLANVFYW 434

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
alka	NP_610619.2	LIC	8..441	CDD:455710	114/427 (27%)
Gabrp	NP_112291.1	LIC	43..437	CDD:455710	116/429 (27%)
		LGIC_ECD	60..241	CDD:475126	58/190 (31%)