DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12344 and gabrg2

DIOPT Version :9

Sequence 1:NP_001286298.1 Gene:CG12344 / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_031754595.1 Gene:gabrg2 / 779514 XenbaseID:XB-GENE-5949005 Length:505 Species:Xenopus tropicalis


Alignment Length:423 Identity:115/423 - (27%)
Similarity:194/423 - (45%) Gaps:55/423 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 YVKEIRPPSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDYV 108
            |..::||.... .|.::...::|..|..:|..:|::.:|:|..|.|.:.||:     |......:
 Frog   107 YDNKLRPDIGV-KPTVIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLK-----FNSTIKVL 165

  Fly   109 TLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMD 173
            .|...:....|.||.:|.|||.|:...:|.....:.::.:..|.|..|:.....||::...:|||
 Frog   166 RLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMD 230

  Fly   174 IQVCPIYIESFSSNNQKVKLRWSDSGVTLNP--ELKLLQYNLGQPLELEESDGYMPEKVGNFSRL 236
            ...||:...|:....:::..:|..|.|.:..  ..:|.|::.   :.|..:...:....|::..:
 Frog   231 EHSCPLEFSSYGYPKEEIIYQWKRSSVEVGDVRSWRLYQFSF---VGLRNTTEEVKTTSGDYVVM 292

  Fly   237 TVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTGA--DIP 299
            ||||...|::|:..|||:.|.:|:|:|||.|||:..||:|.|.:|.:|.:||:.|:.|.|  .:|
 Frog   293 TVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLP 357

  Fly   300 PVAYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQYQYQVNRIPKVLPMRISNMEKGQCATVASW 364
            .|:||.|:||:::.|.:.|||||.|:..:      :.:..||.|.      .:.||.: .....|
 Frog   358 KVSYVTAMDLFVSVCFIFVFAALMEYGTL------HYFVSNRKPS------KDKEKKK-KNPLLW 409

  Fly   365 EGGAVRSRKATQTPTTPGQTSLQGNGGPPKPARRQ------------SLLSVAWTDTDTGVEKIM 417
                :.|.||......|...::|.|.......|.:            :.....:.|..||.    
 Frog   410 ----MFSFKAPTIDIRPRSATIQMNNATHLQERDEEYGYECLDGKDCASFFCCFEDCRTGA---- 466

  Fly   418 WR---------EIDKVSRAVFPILFFVFVLLYW 441
            ||         :||..||..||..|.:|.|:||
 Frog   467 WRHGRIHIRVAKIDSYSRIFFPTAFCLFNLVYW 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12344NP_001286298.1 LIC 8..441 CDD:273305 113/421 (27%)
gabrg2XP_031754595.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1057372at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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