Protein Alignment CG12344 and gabrd

DIOPT Version :9

• Sequence 1: NP_001286298.1
• Gene: CG12344 / 36145
• FlyBaseID: FBgn0033558
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: XP_700099.5
• Gene: gabrd / 571422
• ZFINID: ZDB-GENE-081105-170
• Length: 459
• Species: Danio rerio
• Alignment Length: 457
• Identity: 118/457 - (25%)
• Similarity: 209/457 - (45%)
• Gaps: 65/457 - (14%)

  Fly    14 GLGFILMWLSEATEAHMNYTAKPRVVLPPNYVKEIRPPSKKGSPVIVDFSIFVVDINSINVEDMD 78
            |....:.||....:            |...|.:..| |...|.||.|..:|.|..|:.|:..:|:
Zfish    34 GTDIEISWLPNLDD------------LMKGYARNFR-PGIGGPPVNVAMAIEVASIDHISEANME 85

  Fly    79 FRVDMFIHQRWLESRLEIPDDIFEEGDDYVTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSV 143
            :.:.:|:.|.|.:.||.     :...:..:.|.....:..|.||.:.:|:|.|....:|.:...:
Zfish    86 YTMTVFLRQSWRDDRLS-----YNHTNKTLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLI 145

  Fly   144 TLYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIESFSSNNQKVKLRWSDSGVTLN--PEL 206
            .|..:..:.|::|:.:.:||.|:...||||.|.|.:.:||:..:::.:...||:|...::  .:|
Zfish   146 RLQPDGVILYSSRITSTVACDMDLTKYPMDEQECMLDLESYGYSSEDIVYHWSESQKLIHGLDKL 210

  Fly   207 KLLQYNLGQPLELEESDGYMPEKVGNFSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLG 271
            :|.|:.:.....:.|...:  :..|.|.||::.|:..|..|.::||::.||.|:|.:||.|||:.
Zfish   211 ELSQFTITDYRFVTEMMNF--KSAGRFPRLSLRFQLRRNRGVYIIQSYMPSILLVAMSWVSFWIS 273

  Fly   272 LDAIPGRVTLLVTCMLTLVTMFTGA--DIPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQ 334
            ..|:|.||:|.:|.:||:.|:...|  .:|..:.:||||::...|.:.|||||.|:.... .:..
Zfish   274 QSAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALIEYAFAH-YNAD 337

  Fly   335 YQYQVNRIPKVLPMRISNMEKGQCA------TVASWEGGAV------RSRKA------------- 374
            |..:.....|......|.::.|:.|      :||....|.:      ||.:|
Zfish   338 YSKKEKAKVKTNKNAESMVKNGKQAMVLFSLSVAGMNQGLLISNRQSRSHRASDAAAAAADPHEE 402

  Fly   375 TQTPTTPGQTSLQGNGGPPKPARRQSLLSVAWTDTDTGVEKIMWREIDKVSRAVFPILFFVFVLL 439
            |:|.:...:.:.:.:....|..:.:.:      |.||         ||..:|||||..|.|..::
Zfish   403 TETRSATSRRAQKESSEEKKCCKCKPI------DADT---------IDIYARAVFPFTFAVVNVI 452

  Fly   440 YW 441
            ||
Zfish   453 YW 454

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12344	NP_001286298.1	LIC	8..441	CDD:273305	116/455 (25%)
gabrd	XP_700099.5	LIC	45..457	CDD:273305	115/446 (26%)
		Neur_chan_LBD	45..247	CDD:280998	52/221 (24%)
		Neur_chan_memb	256..454	CDD:280999	57/213 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810