DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12344 and GABRQ

DIOPT Version :9

Sequence 1:NP_001286298.1 Gene:CG12344 / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_061028.3 Gene:GABRQ / 55879 HGNCID:14454 Length:632 Species:Homo sapiens


Alignment Length:405 Identity:120/405 - (29%)
Similarity:195/405 - (48%) Gaps:48/405 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ILMWLSEAT------EAHMNY-TAKPRVVLP---------------------PNYVKEIRPPSKK 54
            |..||:|..      :.|..: :|.|.|||.                     ..|...:| |:..
Human    16 IRTWLAEGNYPSPIPKFHFEFSSAVPEVVLNLFNCKNCANEAVVQKILDRVLSRYDVRLR-PNFG 79

  Fly    55 GSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDYVTLLPEVFENFW 119
            |:||.|..||:|..|..|:..:||:.:.||.||.|.:|||     .:.|....:||...:.|..|
Human    80 GAPVPVRISIYVTSIEQISEMNMDYTITMFFHQTWKDSRL-----AYYETTLNLTLDYRMHEKLW 139

  Fly   120 QPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIESF 184
            .||.||||||.|.:..:|.:.....|:.:.||||..|:....||.::...:|||.|.|.:.:||:
Human   140 VPDCYFLNSKDAFVHDVTVENRVFQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESY 204

  Fly   185 SSNNQKVKLRWSDSG--VTLNPELKLLQYN-LGQPLELEESDGYMPEKVGNFSRLTVYFRFERQI 246
            ....:.:.|.|.|:|  :.:..||.:.|:. ||:.:..:|...|    .|::.||.:.|:.:|::
Human   205 GYTVEDIILFWDDNGNAIHMTEELHIPQFTFLGRTITSKEVYFY----TGSYIRLILKFQVQREV 265

  Fly   247 GHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTGA--DIPPVAYVKALDL 309
            ..:|:|.:.|:.|..:.||.|||:..|:...|||:.:|.||.|.|:.:..  .:|.::.:||:|:
Human   266 NSYLVQVYWPTVLTTITSWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAIDI 330

  Fly   310 WMAGCMLSVFAALAEFVVVKVLDVQYQYQVNRIPK--VLPMRISNMEKGQCATVASWEGGAVRSR 372
            ::..|:..||.:|.|:|.:..|  .|.....|.|:  ..|.|:....:.|...|.:.:.|.:...
Human   331 YILVCLFFVFLSLLEYVYINYL--FYSRGPRRQPRRHRRPRRVIARYRYQQVVVGNVQDGLINVE 393

  Fly   373 KATQT-PTTPGQTSL 386
            ....: |.||.|..|
Human   394 DGVSSLPITPAQAPL 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12344NP_001286298.1 LIC 8..441 CDD:273305 120/405 (30%)
GABRQNP_061028.3 Neur_chan_LBD 60..>353 CDD:332142 97/304 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 410..458
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 491..523
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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