Sequence 1: | NP_001286298.1 | Gene: | CG12344 / 36145 | FlyBaseID: | FBgn0033558 | Length: | 449 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
Alignment Length: | 338 | Identity: | 71/338 - (21%) |
---|---|---|---|
Similarity: | 134/338 - (39%) | Gaps: | 53/338 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 43 NYVKEIRPPSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDY 107
Fly 108 --VTLLPEVFENFWQPDPYFLNS-------KIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIAC 163
Fly 164 QMEFQLYPMDIQVCPIYIESFSSNNQKVKLR----WSDSGVTLNPELKLLQYNLGQPLELEESDG 224
Fly 225 YMPEKVGNFSR---LTVYFR--FERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVT 284
Fly 285 CMLTLVTMF--TGADIPPVAY-VKALDLWMAGCMLSVFAALAEFVVVKVLDVQYQYQVNR----- 341
Fly 342 --------IPKVL 346 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG12344 | NP_001286298.1 | LIC | 8..441 | CDD:273305 | 71/338 (21%) |
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 45/220 (20%) |
LIC | 27..530 | CDD:273305 | 71/338 (21%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 26/110 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |