Protein Alignment alka and SecCl

DIOPT Version :10

• Sequence 1: NP_610619.2
• Gene: alka / 36145
• FlyBaseID: FBgn0033558
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_648984.2
• Gene: SecCl / 39949
• FlyBaseID: FBgn0036727
• Length: 509
• Species: Drosophila melanogaster
• Alignment Length: 457
• Identity: 121/457 - (26%)
• Similarity: 197/457 - (43%)
• Gaps: 93/457 - (20%)

  Fly    54 KGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDYVTLLPEVFENF 118
            |..|::|...|:|..:.::|.:.:.|::...:..|:.:.||..  ..|...|: :.....:.|..
  Fly    71 KRLPIVVKTRIYVYFLQNLNSDLLQFKMHALLQLRFQDKRLAY--KAFNRSDN-ILGQKHLSERL 132

  Fly   119 WQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIES 183
            |.|..:|.|.:.:.|.....|....:|.....|..:.||.|.:.|.|.||.:|.|.|.|...:||
  Fly   133 WLPHIFFANERESSILGTDEKDVLTSLSPEGNVIISTRMQASLYCWMNFQKFPFDQQFCSTVLES 197

  Fly   184 FSSNNQKVKLRWS-DSGVTLNPELKLLQYNLGQ---PLELEESDGYMPEK---VGNFSRLTVYFR 241
            :..|...:.|.|. .:.::.:||::|.:||:.|   ...:.:|||.....   .||:|.|:....
  Fly   198 WMYNTSDLILEWEPHTPISFDPEMRLTEYNMAQFWHNTTIVQSDGDNLRHGAFAGNYSSLSFTVN 262

  Fly   242 FERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFT--GADIPPVAYV 304
            .:|:||.:|:..:.||.::|.:||.||||..||.|.|:.|..:.||:.:|:.:  ..::|.|:|:
  Fly   263 LKREIGFYLLDYYLPSMMIVAISWVSFWLQADASPPRIMLGTSTMLSFITLSSSQSKNLPKVSYI 327

  Fly   305 KALDLWMAGCMLSVFAALAEFVVVKVL----------DVQYQYQVNRIPKVLPMR------ISNM 353
            |..::|..||...:|.:|.||..|..:          .|..:|.:.......|.|      :||.
  Fly   328 KVSEVWFLGCTFFIFGSLVEFAFVNTIWRRKENIELKKVNSKYIIKSTLTPRPARRQIGGSLSNE 392

  Fly   354 EKGQ-CAT----VASWEGGAVRSRKATQTPTTPGQTSLQGNG------------GPPKPARRQ-- 399
            .:.: |::    |:|.|  :||:                |||            .|..|..|.
  Fly   393 SRARSCSSLDNIVSSTE--SVRN----------------GNGTVNQGFNNYLTVHPNLPIIRTEC 439

  Fly   400 ------SLLSVAWTDTD-------------------TGVEKIMWREIDKVSRAVFPILFFVFVLL 439
                  |:.| |.|:.|                   |..|..||  ||:.||.:||.:|..|..|
  Fly   440 AEADTVSICS-ARTNNDHIVDVDKDKKDTPPTFTTMTPQEIAMW--IDRRSRFLFPAMFLAFNAL 501

  Fly   440 YW 441
            ||
  Fly   502 YW 503

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
alka	NP_610619.2	LIC	8..441	CDD:455710	119/455 (26%)
SecCl	NP_648984.2	LIC	43..505	CDD:455710	121/457 (26%)