Protein Alignment CG12344 and gabra6a

DIOPT Version :9

• Sequence 1: NP_001286298.1
• Gene: CG12344 / 36145
• FlyBaseID: FBgn0033558
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: XP_005173169.1
• Gene: gabra6a / 393704
• ZFINID: ZDB-GENE-040426-1692
• Length: 435
• Species: Danio rerio
• Alignment Length: 426
• Identity: 130/426 - (30%)
• Similarity: 201/426 - (47%)
• Gaps: 56/426 - (13%)

  Fly    44 YVKEIRPPSKKGSPVI-VDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDY 107
            |...:||.|  |..|. |...|||.....::..:|:|.:|||..|.|::.||     .|:...:.
Zfish    38 YDNRLRPGS--GVSVTEVKTDIFVTSFGPVSDVNMEFTMDMFFRQMWVDERL-----AFQGPIEI 95

  Fly   108 VTLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTS----VTLYKNKTVRYAARMHAIIACQMEFQ 168
            :.|...:.:..|.||.:|.|::    .:|.|..||    ..:.:|.||.|..|:.....|.|..:
Zfish    96 LPLNNRMVDKIWTPDTFFRNAR----KSLAHNMTSPNKLFRIMQNGTVFYTMRLTVSAVCPMVLR 156

  Fly   169 LYPMDIQVCPIYIESFSSNNQKVKLRWS---DSGVTLNPE-LKLLQYN-LGQPLELEESDGYMPE 228
            .:|||...||:|..|::..|:::...|.   ::.|...|| ..||||: |||.|..|.    ...
Zfish   157 DFPMDGHTCPLYFGSYAYTNREIVYTWRKGLEASVDFPPESSSLLQYDLLGQTLFTET----YKF 217

  Fly   229 KVGNFSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMF 293
            ..|.:|...|:|..:|::|:|||||:.|..:||:||..|||:..:::|.|....:|.:||:.|:.
Zfish   218 STGLYSVQVVHFYLQRKLGYHLIQTYIPLIMVVVLSQVSFWINKESVPARTVAGITTVLTMTTLS 282

  Fly   294 TGA--DIPPVAYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQYQYQVNRIPKVLPMR--ISNME 354
            ..|  .:|.|:|..|:|.::|.|...|.:||.||..|   :.....:.||....||..  :.:..
Zfish   283 ISARSSLPKVSYATAMDWFIAVCFAFVASALVEFAAV---NYYATLEANRENHKLPRGSIVESQA 344

  Fly   355 KGQCATVASWEGG-AVRSRK-----ATQTPTTPGQTSLQGNGGPPKPARRQSLLSVAWTDTDTGV 413
            :|......|.:.. :..|||     .::.|.|.....|||:..||.       :.:|.|..
Zfish   345 QGSDDEPESPQSDTSAYSRKRRGYPVSEAPRTRVPIFLQGSAFPPN-------MMLAGTSA---- 398

  Fly   414 EKIMWREIDKVSRAVFPILFFVFVLLYWPILLMKSS 449
                   |||.||.:||:.|.:|.|:||.|.|.|.:
Zfish   399 -------IDKYSRILFPLAFGIFNLVYWYIYLSKDT 427

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12344	NP_001286298.1	LIC	8..441	CDD:273305	125/416 (30%)
gabra6a	XP_005173169.1	LIC	2..422	CDD:273305	127/419 (30%)
		Neur_chan_LBD	28..234	CDD:280998	62/210 (30%)
		Neur_chan_memb	242..419	CDD:280999	57/197 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1057372at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.820