Protein Alignment alka and Gabrr3

DIOPT Version :10

• Sequence 1: NP_610619.2
• Gene: alka / 36145
• FlyBaseID: FBgn0033558
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_001074659.1
• Gene: Gabrr3 / 328699
• MGIID: 3588203
• Length: 464
• Species: Mus musculus
• Alignment Length: 416
• Identity: 124/416 - (29%)
• Similarity: 197/416 - (47%)
• Gaps: 49/416 - (11%)

  Fly    51 PSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDYVTLLPEVF 115
            |...||||.|...:.|..|:||:..:|||.:..::...|.:.||..|...    :..:|....:.
Mouse    73 PGFGGSPVPVGIDVQVESIDSISEVNMDFTMTFYLRHYWKDERLSFPSTT----NKSMTFDRRLL 133

  Fly   116 ENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIY 180
            :..|.||.:|::||.:.|...|.:...:.::.:..|.::.|:.....|.|:|..:|:|.|.|.:.
Mouse   134 QKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGNVLFSLRITVSAMCFMDFSRFPLDTQNCSLE 198

  Fly   181 IESFSSNNQKVKLRWSDSGVTLNPE--LKLLQYNLGQPLELEESDGY-MPEKVGNFSRLTVYFRF 242
            :||::.|.:.:.|.|.....:||.|  :.|.|:.:.   |...|.|. .....|.:.||.:.|..
Mouse   199 LESYAYNEEDLMLYWKHGNKSLNTEERISLSQFFIE---EFSASSGLAFYSSTGWYYRLFINFVL 260

  Fly   243 ERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTG--ADIPPVAYVK 305
            .|.:...::||:.|:.|:|||||.|||:...|:|.||:|.:|.:||:.|:.||  |.:|.|:|||
Mouse   261 RRHVFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTVVTGVSASMPQVSYVK 325

  Fly   306 ALDLWMAGCMLSVFAALAEFVVVKVL-DVQYQYQVNRIPKVLPMRISNMEKGQCATVASWEGGAV 369
            |:|::|....|.||.::.|:..|..| .|:...|:||..|     ||.|.........:::|...
Mouse   326 AVDVYMWVSSLFVFLSVIEYATVNYLTTVEEWKQLNRRGK-----ISGMYHIDAVQAMAFDGCYH 385

  Fly   370 RSRKATQTPTTPGQTSL-----------QGNGGP---PKPARRQSLLSVAWTDTDTGVEKIMWRE 420
            .|.      |...|||.           :..|.|   ....:|:||        ...|.:|:...
Mouse   386 DSE------TDVDQTSFSLHSEEDSMSTKFTGSPCADSSQIKRKSL--------GGNVGRIILEN 436

  Fly   421 ---IDKVSRAVFPILFFVFVLLYWPI 443
               ||..||.|||.::.:|.|.||.|
Mouse   437 NHVIDTYSRIVFPTVYIIFNLFYWGI 462

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
alka	NP_610619.2	LIC	8..441	CDD:455710	121/412 (29%)
Gabrr3	NP_001074659.1	LIC	58..463	CDD:455710	124/416 (30%)
		LGIC_ECD	79..264	CDD:475126	50/191 (26%)