Protein Alignment CG12344 and Lcch3

DIOPT Version :9

• Sequence 1: NP_001286298.1
• Gene: CG12344 / 36145
• FlyBaseID: FBgn0033558
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Alignment Length: 511
• Identity: 138/511 - (27%)
• Similarity: 225/511 - (44%)
• Gaps: 89/511 - (17%)

  Fly     7 TNAFISFGLGFILMW-----------------LSEATEAHMNYTAKPRVVLPPNYVKEIRPPSKK 54
            |...:|.||.|.|:.                 |...|:...|......:.|.||:         .
  Fly     5 TRVGVSCGLFFFLLGAQLQLIRCIRKDVLAGRLENVTQTISNILQGYDIRLRPNF---------G 60

  Fly    55 GSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRL------EIPDDIFEEG-DDYVTLLP 112
            |.|:.|...:.:...::|:..:||:.:.|:::|.|.:.||      :..||..::| .|.:||..
  Fly    61 GEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSG 125

  Fly   113 EVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQVC 177
            :..|..|.||.:|.|.|.:.:..:|.:...|.|..:..|.|..|....:||.|:...||:|.|.|
  Fly   126 DFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNC 190

  Fly   178 PIYIESFSSNNQKVKLRWSDSGVTLNPELKLLQYNLGQPLELEESDGYMPEKVGNFSRLTVYFRF 242
            .:.|||:......|.:.|..:.|....:.:|.|:.:   :..|.:|.......|.:.||::.|:.
  Fly   191 TVEIESYGYTVSDVVMYWKPTPVRGVEDAELPQFTI---IGYETNDRKERLATGVYQRLSLSFKL 252

  Fly   243 ERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTG--ADIPPVAYVK 305
            :|.||:.:.||:.||.|:|||||.|||:..:|...||.|.:|.:||:.|:.||  :.:|.::|||
  Fly   253 QRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVK 317

  Fly   306 ALDLWMAGCMLSVFAALAEFVVVKVLDVQYQY-------QVNRIPKVLPMRISNMEKGQ-CAT-- 360
            |:|:::..|.:.|||||.|:..     |.|.|       ::.::.:..|.:|...|:.: |:|
  Fly   318 AIDIYLVMCFVFVFAALLEYAA-----VNYTYWGKRAKKKIKKVKECCPGKIGKSERSETCSTTE 377

  Fly   361 ------------VASWEGG---AVRSRKATQT------PTTPGQTSLQGNGGPPKPARRQSLLSV 404
                        :.|...|   |......|:|      |.:...|...|.|......|.|..:|.
  Fly   378 DIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGIST 442

  Fly   405 -------------AWTDTDTGVEKIMWREIDKVSRAVFPILFFVFVLLYWPILLMK 447
                         |...|...::.:  ..|||.||.:|||.|..|.|.||...:::
  Fly   443 RPRMLHALKRGASAIKATIPKIKDV--NIIDKYSRMIFPISFLAFNLGYWLFYILE 496

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12344	NP_001286298.1	LIC	8..441	CDD:273305	135/502 (27%)
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	134/496 (27%)
		Neur_chan_LBD	47..256	CDD:280998	56/220 (25%)
		Neur_chan_memb	263..490	CDD:280999	68/233 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.910