DRSC/TRiP Functional Genomics Resources

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Protein Alignment alka and glra1

DIOPT Version :10

Sequence 1:NP_610619.2 Gene:alka / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_021336638.1 Gene:glra1 / 30676 ZFINID:ZDB-GENE-991117-1 Length:457 Species:Danio rerio


Alignment Length:482 Identity:147/482 - (30%)
Similarity:230/482 - (47%) Gaps:93/482 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FGLGFILMW-------LSEATEAHMNYTAKPRVVLPPN------------YVKEIRP-------- 50
            |.|| |.:|       |:.:.:|.....|.|   :||:            |...|||        
Zfish     2 FALG-IYLWETIVFFSLAASQQAAARKAASP---MPPSEFLDKLMGKVSGYDARIRPNFKDPQGS 62

  Fly    51 ----PSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRL---EIPDDIFEEGDDYV 108
                ..|||.||.|..:||:....||....||:||::|:.|:|.:.||   |.|||..:      
Zfish    63 KSDGTHKKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLD------ 121

  Fly   109 TLLPEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMD 173
             |.|.:.::.|:||.:|.|.|.|....:|.....:.:.||..|.|:.|:..::||.|:.:.:|||
Zfish   122 -LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNFPMD 185

  Fly   174 IQVCPIYIESFSSNNQKVKLRWSDSG-VTLNPELKLLQYNLGQPLELEESDGYMPEKVGNFSRLT 237
            :|.|.:.:|||......:...|.:.| |.:...|.|.|:.|.:..:|.....:.  ..|.|:.:.
Zfish   186 VQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILKEEKDLRYCTKHY--NTGKFTCIE 248

  Fly   238 VYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTG--ADIPP 300
            ..|..|||:|::|||.:.||.|:|:|||.|||:.:||.|.||.|.:|.:||:.|..:|  |.:|.
Zfish   249 ARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPK 313

  Fly   301 VAYVKALDLWMAGCMLSVFAALAEFVVVKVLDVQY----QYQVNRIPKVLPMRISNMEKGQ---- 357
            |:||||:|:|||.|:|.||:||.|:..|..:..|:    ::|..|      ..:...|.|.    
Zfish   314 VSYVKAIDIWMAVCLLFVFSALLEYAAVNFIARQHKELLRFQRRR------RHLKEDEAGDGRFS 372

  Fly   358 -------CATVASWEGGAVR-SRKATQTPTTPGQTSLQGNGGPPKPARRQSLLSVAWTDTDTGVE 414
                   .|.:.:.:|.|:: :.....|.|.|.:.:::        ..|:..:|.|         
Zfish   373 FAAYGMGPACLQAKDGMAIKGNNNNAPTSTNPPEKTVE--------EMRKLFISRA--------- 420

  Fly   415 KIMWREIDKVSRAVFPILFFVFVLLYW 441
                :.||.|||..||::|.:|.:.||
Zfish   421 ----KRIDTVSRVAFPLVFLIFNIFYW 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alkaNP_610619.2 LIC 8..441 CDD:455710 145/480 (30%)
glra1XP_021336638.1 LIC 7..446 CDD:273305 143/476 (30%)

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